RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 GJC2Q5T442 439 aaPredicted RBP14.04□□□□□ -0.16
HLCS-201ENST00000336648 SYDE2Q5VT97 1194 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 RNF139Q8WU17 664 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 TEX12Q9BXU0 123 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 NDST4Q9H3R1 872 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 DBNLQ9UJU6 430 aaKnown RBP14.04□□□□□ -0.16
HLCS-201ENST00000336648 GFPT2O94808 682 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 KRT4P19013 534 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 PHKA1P46020 1223 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 ZBTB41Q5SVQ8 909 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 TRIM67Q6ZTA4 783 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 KPNA7A9QM74 516 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 PPEF1O14829 653 aaPredicted RBP14.04□□□□□ -0.16
HLCS-201ENST00000336648 KRT38O76015 456 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 EAPPQ56P03 285 aaPredicted RBP14.04□□□□□ -0.16
HLCS-201ENST00000336648 ARHGEF25Q86VW2 580 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 PARD3BQ8TEW8 1205 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 CALN1Q9BXU9 219 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 PLA2G4BP0C869 781 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 SCNN1DP51172 638 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 STAT2P52630 851 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 MDM2Q00987 491 aaPredicted RBP14.04□□□□□ -0.16
HLCS-201ENST00000336648 PROM2Q8N271 834 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 RYBPQ8N488 228 aaPredicted RBP14.04□□□□□ -0.16
HLCS-201ENST00000336648 TAB3Q8N5C8 712 aaPredicted RBP14.04□□□□□ -0.16
HLCS-201ENST00000336648 SERPINB13Q9UIV8 391 aa14.04□□□□□ -0.16
HLCS-201ENST00000336648 ANO9A1A5B4 782 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 ARL4CP56559 192 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 PI4K2BQ8TCG2 481 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 POLE3Q9NRF9 147 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 SPAG7O75391 227 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 MOCS3O95396 460 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 PMS1P54277 932 aaKnown RBP14.03□□□□□ -0.16
HLCS-201ENST00000336648 TFAMQ00059 246 aaKnown RBP14.03□□□□□ -0.16
HLCS-201ENST00000336648 C2orf54Q08AI8 447 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 RNF207Q6ZRF8 634 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 NOVA2Q9UNW9 492 aaKnown RBP14.03□□□□□ -0.16
HLCS-201ENST00000336648 CTTNBP2Q8WZ74 1663 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 KIF1CO43896 1103 aaKnown RBP14.03□□□□□ -0.16
HLCS-201ENST00000336648 CYP21A2P08686 494 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 CA4P22748 312 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 ARHGAP18Q8N392 663 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 DCLK2Q8N568 766 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 SYT2Q8N9I0 419 aaPredicted RBP14.03□□□□□ -0.16
HLCS-201ENST00000336648 ZNF280CQ8ND82 737 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 PARD6BQ9BYG5 372 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 RPF1Q9H9Y2 349 aaKnown RBP14.03□□□□□ -0.16
HLCS-201ENST00000336648 PLS3P13797 630 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 PMLP29590 882 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 KLHL38Q2WGJ6 581 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 DIABLOQ9NR28 239 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 JAK3P52333 1124 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 EPHB1P54762 984 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 HDAC4P56524 1084 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 TTC39CQ8N584 583 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 GREM2Q9H772 168 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 SPTLC3Q9NUV7 552 aa14.03□□□□□ -0.16
HLCS-201ENST00000336648 KDM5AP29375 1690 aaKnown RBP14.03□□□□□ -0.16
HLCS-201ENST00000336648 MRPL28Q13084 256 aaKnown RBP14.02□□□□□ -0.16
HLCS-201ENST00000336648 DDX42Q86XP3 938 aaKnown RBP eCLIP14.02□□□□□ -0.16
HLCS-201ENST00000336648 GCNAQ96QF7 691 aa14.02□□□□□ -0.16
HLCS-201ENST00000336648 SLC24A3Q9HC58 644 aa14.02□□□□□ -0.16
HLCS-201ENST00000336648 CASP8Q14790 479 aa14.02□□□□□ -0.16
HLCS-201ENST00000336648 BBS9Q3SYG4 887 aa14.02□□□□□ -0.16
HLCS-201ENST00000336648 NBPF10Q6P3W6 841 aaKnown RBP14.02□□□□□ -0.16
HLCS-201ENST00000336648 GFM2Q969S9 779 aaKnown RBP14.02□□□□□ -0.16
HLCS-201ENST00000336648 SLAIN2Q9P270 581 aa14.02□□□□□ -0.16
HLCS-201ENST00000336648 SLC4A7Q9Y6M7 1214 aa14.02□□□□□ -0.16
HLCS-201ENST00000336648 PNMA6FA0A0J9YX94 578 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 SOX5P35711 763 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 MRPS15P82914 257 aaKnown RBP14.02□□□□□ -0.17
HLCS-201ENST00000336648 E2F4Q16254 413 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 ERICH1Q86X53 443 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 MB21D1Q8N884 522 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 FAM167AQ96KS9 214 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 LRRC37BQ96QE4 947 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 SH3GL3Q99963 347 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 TRIM45Q9H8W5 580 aaPredicted RBP14.02□□□□□ -0.17
HLCS-201ENST00000336648 DDX28Q9NUL7 540 aaKnown RBP14.02□□□□□ -0.17
HLCS-201ENST00000336648 NDE1Q9NXR1 346 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 TRIM33Q9UPN9 1127 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 ATP7AQ04656 1500 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 LRRN2O75325 713 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 FTCDO95954 541 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 GRAMD1BQ3KR37 738 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 SARM1Q6SZW1 724 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 PODNQ7Z5L7 613 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 APOL6Q9BWW8 343 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 LMCD1Q9NZU5 365 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 STRIP2Q9ULQ0 834 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 HSPA4LO95757 839 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 CARSP49589 748 aaKnown RBP14.02□□□□□ -0.17
HLCS-201ENST00000336648 OCRLQ01968 901 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 TNFAIP2Q03169 654 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 ALKBH5Q6P6C2 394 aaKnown RBP14.02□□□□□ -0.17
HLCS-201ENST00000336648 C11orf57Q6ZUT1 292 aaPredicted RBP14.02□□□□□ -0.17
HLCS-201ENST00000336648 DTNBP1Q96EV8 351 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 PAGE5Q96GU1 130 aa14.02□□□□□ -0.17
HLCS-201ENST00000336648 SNX5Q9Y5X3 404 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms