RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 DMP1Q13316 513 aaPredicted RBP10.1□□□□□ -0.79
NLRP3-201ENST00000336119 MMS19Q96T76 1030 aa10.1□□□□□ -0.79
NLRP3-201ENST00000336119 EPB41L5Q9HCM4 733 aa10.1□□□□□ -0.79
NLRP3-201ENST00000336119 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.1□□□□□ -0.79
NLRP3-201ENST00000336119 DDTLA6NHG4 134 aaPredicted RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 PBX1P40424 430 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 PTPROQ16827 1216 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 RNF187Q5TA31 235 aaPredicted RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 EMBQ6PCB8 327 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 RSRC2Q7L4I2 434 aaKnown RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 CATSPER3Q86XQ3 398 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 TMEM139Q8IV31 216 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 PPM1KQ8N3J5 372 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 HNRNPLLQ8WVV9 542 aaKnown RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 SYN2Q92777 582 aaPredicted RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 CCDC127Q96BQ5 260 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 GMCL1Q96IK5 515 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 REEP2Q9BRK0 252 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 TRIM31Q9BZY9 425 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 STMN4Q9H169 189 aaPredicted RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 FAM204AQ9H8W3 233 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 STIM2Q9P246 746 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 PGRMC1O00264 195 aaKnown RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 IPO5O00410 1097 aaKnown RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 RNF40O75150 1001 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 DALRD3Q5D0E6 543 aaKnown RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 LDHDQ86WU2 507 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 SYT2Q8N9I0 419 aaPredicted RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 PRPF38AQ8NAV1 312 aaKnown RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 ATP6V0A1Q93050 837 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 ZFP91Q96JP5 570 aaPredicted RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 MTRQ99707 1265 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 MRIQ9BWK5 157 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 PIM2Q9P1W9 311 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 ADAM21Q9UKJ8 722 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 PPP1R7Q15435 360 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 SEPT7Q16181 437 aaKnown RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 SLC18A3Q16572 532 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 TMEM119Q4V9L6 283 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 NFRKBQ6P4R8 1299 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 PADI6Q6TGC4 694 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 SCLT1Q96NL6 688 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 POLR3CQ9BUI4 534 aaPredicted RBP10.09□□□□□ -0.79
NLRP3-201ENST00000336119 IDI2Q9BXS1 227 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 PCIF1Q9H4Z3 704 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 DNAJC12Q9UKB3 198 aa10.09□□□□□ -0.79
NLRP3-201ENST00000336119 COL1A1P02452 1464 aaPredicted RBP10.08□□□□□ -0.8
NLRP3-201ENST00000336119 SLC16A3O15427 465 aaKnown RBP10.08□□□□□ -0.8
NLRP3-201ENST00000336119 P4HBP07237 508 aaKnown RBP10.08□□□□□ -0.8
NLRP3-201ENST00000336119 LIN9Q5TKA1 542 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 INTS8Q75QN2 995 aaKnown RBP10.08□□□□□ -0.8
NLRP3-201ENST00000336119 LRRN4CLQ8ND94 238 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 ZCCHC17Q9NP64 241 aaKnown RBP10.08□□□□□ -0.8
NLRP3-201ENST00000336119 TBC1D22BQ9NU19 505 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 ZNF70Q9UC06 446 aaPredicted RBP10.08□□□□□ -0.8
NLRP3-201ENST00000336119 TUBGCP6Q96RT7 1819 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 TLDC2A0PJX2 215 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 EIF2AK2P19525 551 aaKnown RBP10.08□□□□□ -0.8
NLRP3-201ENST00000336119 CTNNA2P26232 953 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 SREBF1P36956 1147 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 RSBN1LQ6PCB5 846 aaPredicted RBP10.08□□□□□ -0.8
NLRP3-201ENST00000336119 GMCL1P1Q8NEA9 526 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 SPATA4Q8NEY3 305 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 VCPKMTQ9H867 229 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 GLI3P10071 1580 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 MED24O75448 989 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 ZSCAN20P17040 1043 aaPredicted RBP10.08□□□□□ -0.8
NLRP3-201ENST00000336119 MFAP3P55082 362 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 SLC7A5Q01650 507 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 ALS2CLQ60I27 953 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 TRAPPC11Q7Z392 1133 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 CERS5Q8N5B7 392 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 ZNF507Q8TCN5 953 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 NUDT12Q9BQG2 462 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 CCDC77Q9BR77 488 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 ZNF277Q9NRM2 450 aaPredicted RBP10.08□□□□□ -0.8
NLRP3-201ENST00000336119 NWD2Q9ULI1 1742 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 MYH3P11055 1940 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 MYH2Q9UKX2 1941 aa10.08□□□□□ -0.8
NLRP3-201ENST00000336119 TNNI1P19237 187 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 ANXA13P27216 316 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 FKBP1AP62942 108 aaKnown RBP10.07□□□□□ -0.8
NLRP3-201ENST00000336119 CCDC50Q8IVM0 306 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 NOA1Q8NC60 698 aaKnown RBP10.07□□□□□ -0.8
NLRP3-201ENST00000336119 MSANTD4Q8NCY6 345 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 POMGNT1Q8WZA1 660 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 MKL1Q969V6 931 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 PRMT6Q96LA8 375 aaPredicted RBP10.07□□□□□ -0.8
NLRP3-201ENST00000336119 NT5C1BQ96P26 610 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 UBE2TQ9NPD8 197 aaPredicted RBP10.07□□□□□ -0.8
NLRP3-201ENST00000336119 NDUFAB1O14561 156 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 MSH4O15457 936 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 LRRN2O75325 713 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 ACTN2P35609 894 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 MXI1P50539 228 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 HERVK_113P62684 666 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 PAPD7Q5XG87 772 aaKnown RBP10.07□□□□□ -0.8
NLRP3-201ENST00000336119 CROCCP2Q86T23 111 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 TEX2Q8IWB9 1127 aa10.07□□□□□ -0.8
NLRP3-201ENST00000336119 BANK1Q8NDB2 785 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms