RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 DAGLBQ8NCG7 672 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 FAM129AQ9BZQ8 928 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 SLC12A4Q9UP95 1085 aa19.78■□□□□ 0.76
CLSTN3-202ENST00000331148 A0A087X0T9 212 aa19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 KIF4AO95239 1232 aa19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 FAM228BP0C875 321 aa19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 LRRC63Q05C16 580 aa19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 ERMARDQ5T6L9 678 aa19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 STYK1Q6J9G0 422 aa19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 CRELD2Q6UXH1 353 aaPredicted RBP19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 GUF1Q8N442 669 aaKnown RBP19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 ACTRT1Q8TDG2 376 aa19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 ANKS1AQ92625 1134 aa19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 PBKQ96KB5 322 aa19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 KIAA1551Q9HCM1 1747 aa19.77■□□□□ 0.76
CLSTN3-202ENST00000331148 SART1O43290 800 aaKnown RBP19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 CEP104O60308 925 aa19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 GSTA1P08263 222 aa19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 GSTO1P78417 241 aa19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 DPP8Q6V1X1 898 aaPredicted RBP19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 CCDC63Q8NA47 563 aa19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 PROCA1Q8NCQ7 364 aaPredicted RBP19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 MDM1Q8TC05 714 aa19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 NSMCE1Q8WV22 266 aa19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 TLCD1Q96CP7 247 aa19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 CALR3Q96L12 384 aaKnown RBP19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 AP1M1Q9BXS5 423 aa19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 ZC3H12CQ9C0D7 883 aaKnown RBP19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 LRRC4CQ9HCJ2 640 aa19.77■□□□□ 0.75
CLSTN3-202ENST00000331148 MYH1P12882 1939 aa19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 USP17L12C9JPN9 530 aa19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 USP17L21D6R901 530 aa19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 F8VZ95 297 aa19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 RIMBP2O15034 1052 aa19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 USP11P51784 963 aa19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 MYO1EQ12965 1108 aa19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 UNC13DQ70J99 1090 aa19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 CENPTQ96BT3 561 aa19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 LSM14BQ9BX40 385 aaKnown RBP19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 CRNKL1Q9BZJ0 848 aaKnown RBP19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 BAZ2AQ9UIF9 1905 aaKnown RBP19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 DAPK3O43293 454 aa19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 POLR2FP61218 127 aaKnown RBP19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 MMTAG2Q9BU76 263 aaKnown RBP19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 DDX47Q9H0S4 455 aaKnown RBP19.76■□□□□ 0.75
CLSTN3-202ENST00000331148 PGRMC1O00264 195 aaKnown RBP19.75■□□□□ 0.75
CLSTN3-202ENST00000331148 CTNND1O60716 968 aaKnown RBP19.75■□□□□ 0.75
CLSTN3-202ENST00000331148 CALRP27797 417 aaKnown RBP19.75■□□□□ 0.75
CLSTN3-202ENST00000331148 RIPK1Q13546 671 aa19.75■□□□□ 0.75
CLSTN3-202ENST00000331148 ZKSCAN8Q15776 578 aaPredicted RBP19.75■□□□□ 0.75
CLSTN3-202ENST00000331148 CEP120Q8N960 986 aa19.75■□□□□ 0.75
CLSTN3-202ENST00000331148 PDGFDQ9GZP0 370 aaPredicted RBP19.75■□□□□ 0.75
CLSTN3-202ENST00000331148 COA1Q9GZY4 146 aa19.75■□□□□ 0.75
CLSTN3-202ENST00000331148 NOC2LQ9Y3T9 749 aaKnown RBP19.75■□□□□ 0.75
CLSTN3-202ENST00000331148 MYMKA6NI61 221 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 BTNL10A8MVZ5 291 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 SKAP2O75563 359 aaPredicted RBP19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 LDHCP07864 332 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 CCNHP51946 323 aaPredicted RBP19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 GRIK3Q13003 919 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 GRIK5Q16478 980 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 C11orf91Q3C1V1 193 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 SV2BQ7L1I2 683 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 ANKS4BQ8N8V4 417 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 TCP11Q8WWU5 503 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 ZNF317Q96PQ6 595 aaPredicted RBP19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 BATF3Q9NR55 127 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 ADAMTS1Q9UHI8 967 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 C15orf41Q9Y2V0 281 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 PVALEFA0A1B0GWK0 134 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 ARID5AQ03989 594 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 DHX9Q08211 1270 aaKnown RBP19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 RAPGEF1Q13905 1077 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 GALNT17Q6IS24 598 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 GOLPH3Q9H4A6 298 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 ATP8A2Q9NTI2 1148 aa19.74■□□□□ 0.75
CLSTN3-202ENST00000331148 TECP42680 631 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 KLHL30Q0D2K2 578 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 ITIH4Q14624 930 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 KCTD19Q17RG1 926 aaPredicted RBP19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 HEATR3Q7Z4Q2 680 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 THOC1Q96FV9 657 aaKnown RBP19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 CALML4Q96GE6 196 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 TSG101Q99816 390 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 PNMA2Q9UL42 364 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 CCDC188H7C350 402 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 CLTAP09496 248 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 ZBTB48P10074 688 aaPredicted RBP19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 CHRNA5P30532 468 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 MFSD14BQ5SR56 506 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 CCHCR1Q8TD31 782 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 CNKSR1Q969H4 720 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 BLOC1S4Q9NUP1 217 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 AMACRQ9UHK6 382 aa19.73■□□□□ 0.75
CLSTN3-202ENST00000331148 CFAP73A6NFT4 308 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 STXBP3O00186 592 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 KRIT1O00522 736 aa19.72■□□□□ 0.75
CLSTN3-202ENST00000331148 ASAP2O43150 1006 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms