RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 NLRP4Q96MN2 994 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 GPRC5CQ9NQ84 441 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 KIAA0754O94854 1291 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 TMOD1P28289 359 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 PPP1R18Q6NYC8 613 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 CAPN12Q6ZSI9 719 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 EHD2Q9NZN4 543 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 MYCP01106 439 aaPredicted RBP17.48■□□□□ 0.39
SYNM-201ENST00000328642 LIMA1Q9UHB6 759 aaKnown RBP17.48■□□□□ 0.39
SYNM-201ENST00000328642 HACL1Q9UJ83 578 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 ADAMTSL3P82987 1691 aa17.48■□□□□ 0.39
SYNM-201ENST00000328642 HIP1RO75146 1068 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 ERVK-24P63145 666 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 SUPT20HL1Q3ZLR7 823 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 SLC7A3Q8WY07 619 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 TAAR1Q96RJ0 339 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 ABCB6Q9NP58 842 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 PDS5AQ29RF7 1337 aaKnown RBP17.47■□□□□ 0.39
SYNM-201ENST00000328642 ENTPD3O75355 529 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 CASP4P49662 377 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 RPS6P62753 249 aaKnown RBP17.47■□□□□ 0.39
SYNM-201ENST00000328642 PDIA5Q14554 519 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 KCNB1Q14721 858 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 WHAMMP3Q1A5X7 153 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 SELENOSQ9BQE4 189 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 SEMA6BQ9H3T3 888 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 NXF1Q9UBU9 619 aaKnown RBP17.47■□□□□ 0.39
SYNM-201ENST00000328642 DNAJC12Q9UKB3 198 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 MXI1P50539 228 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 SCARA5Q6ZMJ2 495 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 THNSL1Q8IYQ7 743 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 C7orf25Q9BPX7 421 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 INTS13Q9NVM9 706 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 PTPN22Q9Y2R2 807 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 SOX10P56693 466 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 PSMD2Q13200 908 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 STYK1Q6J9G0 422 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 DCUN1D2Q6PH85 259 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 CDR2LQ86X02 465 aaPredicted RBP17.47■□□□□ 0.39
SYNM-201ENST00000328642 RNF169Q8NCN4 708 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 RUSC1Q9BVN2 902 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 FEM1BQ9UK73 627 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 AMFRQ9UKV5 643 aa17.47■□□□□ 0.39
SYNM-201ENST00000328642 PALMO75781 387 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 KCTD2Q14681 263 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 CCDC105Q8IYK2 499 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 KBTBD4Q9NVX7 518 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 VIRMAQ69YN4 1812 aaKnown RBP17.46■□□□□ 0.39
SYNM-201ENST00000328642 GOLGA6BA6NDN3 693 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 FAM86B1E9PN63 330 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 FAM86B2P0C5J1 330 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 RDXP35241 583 aaKnown RBP17.46■□□□□ 0.39
SYNM-201ENST00000328642 TFAMQ00059 246 aaKnown RBP17.46■□□□□ 0.39
SYNM-201ENST00000328642 MDM2Q00987 491 aaPredicted RBP17.46■□□□□ 0.39
SYNM-201ENST00000328642 GLYCTKQ8IVS8 523 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 REXO1L1PQ8IX06 675 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 RABGGTAQ92696 567 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 IKZF4Q9H2S9 585 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 ELP3Q9H9T3 547 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 EPB41L5Q9HCM4 733 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 MYO3BQ8WXR4 1341 aa17.46■□□□□ 0.39
SYNM-201ENST00000328642 DENND3A2RUS2 1198 aa17.46■□□□□ 0.38
SYNM-201ENST00000328642 IFNB1P01574 187 aa17.46■□□□□ 0.38
SYNM-201ENST00000328642 CRY2Q49AN0 593 aa17.46■□□□□ 0.38
SYNM-201ENST00000328642 SESTD1Q86VW0 696 aa17.46■□□□□ 0.38
SYNM-201ENST00000328642 PASD1Q8IV76 773 aa17.46■□□□□ 0.38
SYNM-201ENST00000328642 WNT10BO00744 389 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 CYP11B2P19099 503 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 USP14P54578 494 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 KAZNQ674X7 775 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 KIAA0895Q8NCT3 520 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 ATP6V0A1Q93050 837 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 MS4A14Q96JA4 679 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 FAM213AQ9BRX8 229 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
SYNM-201ENST00000328642 IRX5P78411 483 aaPredicted RBP17.45■□□□□ 0.38
SYNM-201ENST00000328642 ZNF211Q13398 564 aaPredicted RBP17.45■□□□□ 0.38
SYNM-201ENST00000328642 MCTP2Q6DN12 878 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 RETREG2Q8NC44 543 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 MTRQ99707 1265 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 ASIC3Q9UHC3 531 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 KCNA1Q09470 495 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 SNX1Q13596 522 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 NAALADL2Q58DX5 795 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 SEL1L2Q5TEA6 688 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 PNMA5Q96PV4 448 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 LACRTQ9GZZ8 138 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 KCNH7Q9NS40 1196 aa17.45■□□□□ 0.38
SYNM-201ENST00000328642 SARSP49591 514 aaKnown RBP17.44■□□□□ 0.38
SYNM-201ENST00000328642 TTI2Q6NXR4 508 aa17.44■□□□□ 0.38
SYNM-201ENST00000328642 ZNF710Q8N1W2 664 aa17.44■□□□□ 0.38
SYNM-201ENST00000328642 KIFAP3Q92845 792 aa17.44■□□□□ 0.38
SYNM-201ENST00000328642 ACCSQ96QU6 501 aa17.44■□□□□ 0.38
SYNM-201ENST00000328642 DNAJC17Q9NVM6 304 aaKnown RBP17.44■□□□□ 0.38
SYNM-201ENST00000328642 TMEM143Q96AN5 459 aa17.44■□□□□ 0.38
SYNM-201ENST00000328642 MMS19Q96T76 1030 aa17.44■□□□□ 0.38
SYNM-201ENST00000328642 GAP43P17677 238 aa17.44■□□□□ 0.38
SYNM-201ENST00000328642 CAP2P40123 477 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms