RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 RMND1Q9NWS8 449 aa20.92■□□□□ 0.94
EXOSC3-201ENST00000327304 PCDHA10Q9Y5I2 948 aa20.92■□□□□ 0.94
EXOSC3-201ENST00000327304 CYBAP13498 195 aa20.91■□□□□ 0.94
EXOSC3-201ENST00000327304 TNFAIP2Q03169 654 aa20.91■□□□□ 0.94
EXOSC3-201ENST00000327304 UGCGQ16739 394 aa20.91■□□□□ 0.94
EXOSC3-201ENST00000327304 DUSP28Q4G0W2 176 aa20.91■□□□□ 0.94
EXOSC3-201ENST00000327304 TPH2Q8IWU9 490 aa20.91■□□□□ 0.94
EXOSC3-201ENST00000327304 LXNQ9BS40 222 aa20.91■□□□□ 0.94
EXOSC3-201ENST00000327304 BLOC1S4Q9NUP1 217 aa20.91■□□□□ 0.94
EXOSC3-201ENST00000327304 ZKSCAN5Q9Y2L8 839 aa20.91■□□□□ 0.94
EXOSC3-201ENST00000327304 TRIM17Q9Y577 477 aa20.91■□□□□ 0.94
EXOSC3-201ENST00000327304 GSTTP1A0A1W2PQM5 241 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 GH1P01241 217 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 SUPT20HL2P0C7V6 817 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 HSDL1Q3SXM5 330 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 ENOX1Q8TC92 643 aaKnown RBP20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 NEK9Q8TD19 979 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 LENG1Q96BZ8 264 aaPredicted RBP20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 SPATA33Q96N06 139 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 NT5C3AQ9H0P0 336 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 NRBP1Q9UHY1 535 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 HTTP42858 3142 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 ATG7O95352 703 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 P4HBP07237 508 aaKnown RBP20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 PSAPP07602 524 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 PSMC6P62333 389 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 CACNB2Q08289 660 aaPredicted RBP20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 CUL4BQ13620 913 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 CCDC60Q8IWA6 550 aaPredicted RBP20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 GPR20Q99678 358 aa20.9■□□□□ 0.94
EXOSC3-201ENST00000327304 E9PMD0 336 aa20.89■□□□□ 0.93
EXOSC3-201ENST00000327304 MSNP26038 577 aaKnown RBP20.89■□□□□ 0.93
EXOSC3-201ENST00000327304 CASP1P29466 404 aa20.89■□□□□ 0.93
EXOSC3-201ENST00000327304 PRMT2P55345 433 aa20.89■□□□□ 0.93
EXOSC3-201ENST00000327304 SWSAP1Q6NVH7 229 aa20.89■□□□□ 0.93
EXOSC3-201ENST00000327304 MIS18BP1Q6P0N0 1132 aa20.89■□□□□ 0.93
EXOSC3-201ENST00000327304 STAMQ92783 540 aa20.89■□□□□ 0.93
EXOSC3-201ENST00000327304 HSD3B7Q9H2F3 369 aa20.89■□□□□ 0.93
EXOSC3-201ENST00000327304 GABBR1Q9UBS5 961 aa20.89■□□□□ 0.93
EXOSC3-201ENST00000327304 STK17AQ9UEE5 414 aa20.89■□□□□ 0.93
EXOSC3-201ENST00000327304 WDR81Q562E7 1941 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 NOP56O00567 594 aaKnown RBP20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 HMGCRP04035 888 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 PRKAR2AP13861 404 aaKnown RBP20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 QARSP47897 775 aaKnown RBP20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 LAMC2Q13753 1193 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 SEPT1Q8WYJ6 367 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 RAD54LQ92698 747 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 EMID1Q96A84 441 aaPredicted RBP20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 FAM184BQ9ULE4 1060 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 GNEQ9Y223 722 aaKnown RBP20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 PTCH2Q9Y6C5 1203 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 ZBTB39O15060 712 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 NKRFO15226 690 aaKnown RBP eCLIP20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 RPN1P04843 607 aaKnown RBP20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 TCF7P36402 384 aaPredicted RBP20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 MCM6Q14566 821 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 KCNB1Q14721 858 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 OR6J1Q8NGC5 347 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 PXYLP1Q8TE99 480 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 AFG1LQ8WV93 481 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 PCYT2Q99447 389 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 BLZF1Q9H2G9 400 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 ZSWIM4Q9H7M6 989 aa20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 RRAGDQ9NQL2 400 aaPredicted RBP20.88■□□□□ 0.93
EXOSC3-201ENST00000327304 IGKV6D-21A0A0A0MT36 114 aa20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 BACH1O14867 736 aa20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 HSPA8P11142 646 aaKnown RBP20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 MUTP22033 750 aa20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 PSMC5P62195 406 aa20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 AMPD3Q01432 767 aa20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 DHX8Q14562 1220 aaKnown RBP20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 ZNF658Q5TYW1 1059 aaPredicted RBP20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 DRC7Q8IY82 874 aa20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 PIGOQ8TEQ8 1089 aa20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 LARP4BQ92615 738 aaKnown RBP20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.87■□□□□ 0.93
EXOSC3-201ENST00000327304 ZNF862O60290 1169 aa20.86■□□□□ 0.93
EXOSC3-201ENST00000327304 AKR1A1P14550 325 aa20.86■□□□□ 0.93
EXOSC3-201ENST00000327304 SPC24Q8NBT2 197 aa20.86■□□□□ 0.93
EXOSC3-201ENST00000327304 PPTC7Q8NI37 304 aa20.86■□□□□ 0.93
EXOSC3-201ENST00000327304 DNM3Q9UQ16 869 aa20.86■□□□□ 0.93
EXOSC3-201ENST00000327304 IGSF9BQ9UPX0 1349 aa20.86■□□□□ 0.93
EXOSC3-201ENST00000327304 DYNC1LI2O43237 492 aaPredicted RBP20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 LYPLA2O95372 231 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 PLA2G4BP0C869 781 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 CCND3P30281 292 aaPredicted RBP20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 MAP3K21Q5TCX8 1036 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 SLAIN1Q8ND83 568 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 ATP6V0A1Q93050 837 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 C7orf25Q9BPX7 421 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 GTPBP4Q9BZE4 634 aaKnown RBP20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 ZNF302Q9NR11 478 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 PPP1R3GB7ZBB8 358 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 CNGA1P29973 690 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 UTP14CQ5TAP6 766 aaKnown RBP20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 TLK2Q86UE8 772 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 TRIM50Q86XT4 487 aa20.85■□□□□ 0.93
EXOSC3-201ENST00000327304 C4orf19Q8IY42 314 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms