RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SSBP05455 408 aaKnown RBP eCLIP11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 CCDC192P0DO97 292 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 XRCC6P12956 609 aaKnown RBP eCLIP11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 GPBP1Q86WP2 473 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 DNAJC5GQ8N7S2 189 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 PIGOQ8TEQ8 1089 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 GSDMAQ96QA5 445 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 PCYT2Q99447 389 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 BHMT2Q9H2M3 363 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 FAM184BQ9ULE4 1060 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 A0A087WWV3 80 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 ZNF862O60290 1169 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 YWHABP31946 246 aaKnown RBP11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 PRKCEQ02156 737 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 STX1AQ16623 288 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 TRIML1Q8N9V2 468 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 OR6J1Q8NGC5 347 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 TSPY26PQ9H489 355 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 ANKEF1Q9NU02 776 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 TSKSQ9UJT2 592 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 MAN1B1Q9UKM7 699 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 GNEQ9Y223 722 aaKnown RBP11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 RPN1P04843 607 aaKnown RBP11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 HOXD8P13378 290 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 CYP11B2P19099 503 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 PTGS1P23219 599 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 ASIC1P78348 528 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 TRPV1Q8NER1 839 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 RAET1EQ8TD07 263 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 PXYLP1Q8TE99 480 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 AZI2Q9H6S1 392 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 RMND1Q9NWS8 449 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 KCND2Q9NZV8 630 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 ARHGEF35A5YM69 484 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 BIN1O00499 593 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 ZBTB39O15060 712 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 KLRC4O43908 158 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 ADCY3O60266 1144 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 STBD1O95210 358 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 HMGCRP04035 888 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 AKR1A1P14550 325 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 ELNP15502 786 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 NLRP12P59046 1061 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 KCNB1Q14721 858 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 XKR3Q5GH77 459 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 AFG1LQ8WV93 481 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 DDX12PQ92771 950 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 BMP2KQ9NSY1 1161 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 ANO10Q9NW15 660 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 Q9Y3F1 56 aa11.41□□□□□ -0.58
VIPAS39-201ENST00000327028 OATP04181 439 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 MMP3P08254 477 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 RARRES1P49788 294 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 STAT5BP51692 787 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 MORC3Q14149 939 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 ARSHQ5FYA8 562 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 UNC13DQ70J99 1090 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 OTUD6AQ7L8S5 288 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 PLPPR4Q7Z2D5 763 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 TLK2Q86UE8 772 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 DNAJC19Q96DA6 116 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 CCDC43Q96MW1 224 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 RUSC1Q9BVN2 902 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 PVALEFA0A1B0GWK0 134 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 ATP4AP20648 1035 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 SLC26A2P50443 739 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 CACNB2Q08289 660 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 UTP14CQ5TAP6 766 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 RINT1Q6NUQ1 792 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 ANO5Q75V66 913 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 SLAIN1Q8ND83 568 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 CCDC47Q96A33 483 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 FAM167AQ96KS9 214 aa11.4□□□□□ -0.58
VIPAS39-201ENST00000327028 RHOBTB3O94955 611 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 PRKAR2AP13861 404 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 TRIM32Q13049 653 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 MAP3K21Q5TCX8 1036 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 C1orf186Q6ZWK4 172 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 DYMQ7RTS9 669 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 TRIM50Q86XT4 487 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 LENG1Q96BZ8 264 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 SMARCAD1Q9H4L7 1026 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 EXOC1Q9NV70 894 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 SEPT9Q9UHD8 586 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 A6NJR5 290 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 DYNC1LI2O43237 492 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 LGALS2P05162 132 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 KRT18P05783 430 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 GUCY2CP25092 1073 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 GIT2Q14161 759 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 KMT5BQ4FZB7 885 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 XKR9Q5GH70 373 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 PLA2G4FQ68DD2 849 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 PADI6Q6TGC4 694 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 GLG1Q92896 1179 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 REEP2Q9BRK0 252 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 AP5M1Q9H0R1 490 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 TRIM17Q9Y577 477 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 NPHP3-ACAD11A0A0J9YXS1 232 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 FRMD3A2A2Y4 597 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms