RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 KLRC1P26715 233 aa14.38□□□□□ -0.11
CKS2-201ENST00000314355 HTRA4P83105 476 aaPredicted RBP14.38□□□□□ -0.11
CKS2-201ENST00000314355 ITGB3BPQ13352 177 aaPredicted RBP14.38□□□□□ -0.11
CKS2-201ENST00000314355 MARCH8Q5T0T0 291 aa14.38□□□□□ -0.11
CKS2-201ENST00000314355 GALNT17Q6IS24 598 aa14.38□□□□□ -0.11
CKS2-201ENST00000314355 ZNF746Q6NUN9 644 aaPredicted RBP14.38□□□□□ -0.11
CKS2-201ENST00000314355 MTHFD1LQ6UB35 978 aa14.38□□□□□ -0.11
CKS2-201ENST00000314355 ABHD15Q6UXT9 468 aa14.38□□□□□ -0.11
CKS2-201ENST00000314355 FIBCD1Q8N539 461 aa14.38□□□□□ -0.11
CKS2-201ENST00000314355 PCYT2Q99447 389 aa14.38□□□□□ -0.11
CKS2-201ENST00000314355 SUGCTQ9HAC7 445 aa14.38□□□□□ -0.11
CKS2-201ENST00000314355 VPS54Q9P1Q0 977 aa14.38□□□□□ -0.11
CKS2-201ENST00000314355 TRPV2Q9Y5S1 764 aa14.38□□□□□ -0.11
CKS2-201ENST00000314355 GBF1Q92538 1859 aa14.38□□□□□ -0.11
CKS2-201ENST00000314355 PPFIA3O75145 1194 aa14.37□□□□□ -0.11
CKS2-201ENST00000314355 TMOD1P28289 359 aa14.37□□□□□ -0.11
CKS2-201ENST00000314355 PAK2Q13177 524 aa14.37□□□□□ -0.11
CKS2-201ENST00000314355 STK3Q13188 491 aa14.37□□□□□ -0.11
CKS2-201ENST00000314355 ANKRD1Q15327 319 aa14.37□□□□□ -0.11
CKS2-201ENST00000314355 NTRK3Q16288 839 aa14.37□□□□□ -0.11
CKS2-201ENST00000314355 TCTN1Q2MV58 587 aa14.37□□□□□ -0.11
CKS2-201ENST00000314355 FBXO47Q5MNV8 452 aa14.37□□□□□ -0.11
CKS2-201ENST00000314355 TRMT1LQ7Z2T5 733 aaKnown RBP14.37□□□□□ -0.11
CKS2-201ENST00000314355 FAM177A1Q8N128 213 aaPredicted RBP14.37□□□□□ -0.11
CKS2-201ENST00000314355 ATP8B4Q8TF62 1192 aa14.37□□□□□ -0.11
CKS2-201ENST00000314355 BBXQ8WY36 941 aaPredicted RBP14.37□□□□□ -0.11
CKS2-201ENST00000314355 CELF4Q9BZC1 486 aaKnown RBP14.37□□□□□ -0.11
CKS2-201ENST00000314355 SLKQ9H2G2 1235 aaPredicted RBP14.37□□□□□ -0.11
CKS2-201ENST00000314355 NCOA5Q9HCD5 579 aaKnown RBP14.37□□□□□ -0.11
CKS2-201ENST00000314355 LRFN2Q9ULH4 789 aa14.37□□□□□ -0.11
CKS2-201ENST00000314355 GINS2Q9Y248 185 aa14.37□□□□□ -0.11
CKS2-201ENST00000314355 COL1A2P08123 1366 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 NID2Q14112 1375 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 IGKV6D-21A0A0A0MT36 114 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 TNFRSF10AO00220 468 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 ENPP3O14638 875 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 GAS7O60861 476 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 CENPBP07199 599 aaPredicted RBP14.36□□□□□ -0.11
CKS2-201ENST00000314355 CIITAP33076 1130 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 MGAT3Q09327 533 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 TMEM62Q0P6H9 643 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 NFX1Q12986 1120 aaKnown RBP14.36□□□□□ -0.11
CKS2-201ENST00000314355 GPM6BQ13491 265 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 LPIN1Q14693 890 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 TMEM192Q8IY95 271 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 ZNF710Q8N1W2 664 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 GDPD5Q8WTR4 605 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 FAM167AQ96KS9 214 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 TEKT3Q9BXF9 490 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 UPF3BQ9BZI7 483 aaKnown RBP14.36□□□□□ -0.11
CKS2-201ENST00000314355 PCDHA4Q9UN74 947 aa14.36□□□□□ -0.11
CKS2-201ENST00000314355 LAMA2P24043 3122 aaKnown RBP14.36□□□□□ -0.11
CKS2-201ENST00000314355 DOCK5Q9H7D0 1870 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.35□□□□□ -0.11
CKS2-201ENST00000314355 EPOPA6NHQ4 379 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 WDR64B1ANS9 1081 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 GPR182O15218 404 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 MAGEB2O15479 319 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 DHX15O43143 795 aaKnown RBP14.35□□□□□ -0.11
CKS2-201ENST00000314355 MARCH6O60337 910 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 ARHGEF15O94989 841 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 RB1P06400 928 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 CD52P31358 61 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 SFNP31947 248 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 JAK3P52333 1124 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 TOB2Q14106 344 aaPredicted RBP14.35□□□□□ -0.11
CKS2-201ENST00000314355 BTG3Q14201 252 aaPredicted RBP14.35□□□□□ -0.11
CKS2-201ENST00000314355 EPC2Q52LR7 807 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 BLIDQ8IZY5 108 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 METTL13Q8N6R0 699 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
CKS2-201ENST00000314355 RASGRP4Q8TDF6 673 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 TRAPPC12Q8WVT3 735 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 WASF1Q92558 559 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 UIMC1Q96RL1 719 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 UHRF1Q96T88 793 aaPredicted RBP14.35□□□□□ -0.11
CKS2-201ENST00000314355 RIT2Q99578 217 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 C17orf80Q9BSJ5 609 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 DISC1Q9NRI5 854 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 GABBR1Q9UBS5 961 aa14.35□□□□□ -0.11
CKS2-201ENST00000314355 IGLV3-22A0A075B6J6 115 aa14.34□□□□□ -0.11
CKS2-201ENST00000314355 RPS6KA5O75582 802 aa14.34□□□□□ -0.11
CKS2-201ENST00000314355 CCNE2O96020 404 aa14.34□□□□□ -0.11
CKS2-201ENST00000314355 ANAPC15P60006 121 aa14.34□□□□□ -0.11
CKS2-201ENST00000314355 LRCH2Q5VUJ6 765 aa14.34□□□□□ -0.11
CKS2-201ENST00000314355 CCDC60Q8IWA6 550 aaPredicted RBP14.34□□□□□ -0.11
CKS2-201ENST00000314355 ADAMTS19Q8TE59 1207 aa14.34□□□□□ -0.11
CKS2-201ENST00000314355 TBCKQ8TEA7 893 aa14.34□□□□□ -0.11
CKS2-201ENST00000314355 CRYGNQ8WXF5 182 aa14.34□□□□□ -0.11
CKS2-201ENST00000314355 MAP7D2Q96T17 732 aa14.34□□□□□ -0.11
CKS2-201ENST00000314355 PADI3Q9ULW8 664 aa14.34□□□□□ -0.11
CKS2-201ENST00000314355 PCDHB7Q9Y5E2 793 aa14.34□□□□□ -0.11
CKS2-201ENST00000314355 MAFBQ9Y5Q3 323 aaPredicted RBP14.34□□□□□ -0.11
CKS2-201ENST00000314355 CCDC194A0A1B0GVG4 234 aa14.33□□□□□ -0.12
CKS2-201ENST00000314355 DENND3A2RUS2 1198 aa14.33□□□□□ -0.12
CKS2-201ENST00000314355 H3BNC9 293 aa14.33□□□□□ -0.12
CKS2-201ENST00000314355 LPXNO60711 386 aa14.33□□□□□ -0.12
CKS2-201ENST00000314355 CTNNB1P35222 781 aa14.33□□□□□ -0.12
CKS2-201ENST00000314355 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
CKS2-201ENST00000314355 NONOQ15233 471 aaKnown RBP eCLIP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms