RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 GCNT3O95395 438 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 KRT14P02533 472 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 FOXR2Q6PJQ5 311 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 CRYGNQ8WXF5 182 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 ZIM3Q96PE6 472 aa27.79■■■□□ 2.04
HOXB3-201ENST00000311626 KCNK3O14649 394 aa27.78■■■□□ 2.04
HOXB3-201ENST00000311626 SYT2Q8N9I0 419 aaPredicted RBP27.78■■■□□ 2.04
HOXB3-201ENST00000311626 DCAF4Q8WV16 495 aa27.78■■■□□ 2.04
HOXB3-201ENST00000311626 CCDC43Q96MW1 224 aaKnown RBP27.78■■■□□ 2.04
HOXB3-201ENST00000311626 MBOAT7Q96N66 472 aa27.78■■■□□ 2.04
HOXB3-201ENST00000311626 AFPP02771 609 aaKnown RBP27.78■■■□□ 2.04
HOXB3-201ENST00000311626 ZNF76P36508 570 aa27.78■■■□□ 2.04
HOXB3-201ENST00000311626 EXOC3L4Q17RC7 722 aa27.78■■■□□ 2.04
HOXB3-201ENST00000311626 EDRF1Q3B7T1 1238 aa27.78■■■□□ 2.04
HOXB3-201ENST00000311626 NAP1L4Q99733 375 aaKnown RBP27.78■■■□□ 2.04
HOXB3-201ENST00000311626 RPA1P27694 616 aa27.77■■■□□ 2.04
HOXB3-201ENST00000311626 RRP1BQ14684 758 aaKnown RBP27.77■■■□□ 2.04
HOXB3-201ENST00000311626 MSL1Q68DK7 614 aa27.77■■■□□ 2.04
HOXB3-201ENST00000311626 CASKIN2Q8WXE0 1202 aa27.77■■■□□ 2.04
HOXB3-201ENST00000311626 NYAP2Q9P242 653 aa27.77■■■□□ 2.04
HOXB3-201ENST00000311626 AFF2P51816 1311 aa27.77■■■□□ 2.04
HOXB3-201ENST00000311626 OPLAHO14841 1288 aa27.77■■■□□ 2.04
HOXB3-201ENST00000311626 ZC3H3Q8IXZ2 948 aaKnown RBP27.77■■■□□ 2.04
HOXB3-201ENST00000311626 MKL1Q969V6 931 aa27.77■■■□□ 2.04
HOXB3-201ENST00000311626 PI4KBQ9UBF8 816 aa27.77■■■□□ 2.04
HOXB3-201ENST00000311626 PCDHGC5Q9Y5F6 944 aa27.77■■■□□ 2.04
HOXB3-201ENST00000311626 ZC2HC1CQ53FD0 456 aaPredicted RBP27.76■■■□□ 2.04
HOXB3-201ENST00000311626 ERMNQ8TAM6 284 aa27.76■■■□□ 2.04
HOXB3-201ENST00000311626 LUC7LQ9NQ29 371 aaKnown RBP27.76■■■□□ 2.04
HOXB3-201ENST00000311626 HSF2BPO75031 334 aa27.76■■■□□ 2.03
HOXB3-201ENST00000311626 GH2P01242 217 aa27.76■■■□□ 2.03
HOXB3-201ENST00000311626 NR3C1P04150 777 aa27.76■■■□□ 2.03
HOXB3-201ENST00000311626 XRCC5P13010 732 aaKnown RBP27.76■■■□□ 2.03
HOXB3-201ENST00000311626 NMT1P30419 496 aaKnown RBP27.76■■■□□ 2.03
HOXB3-201ENST00000311626 IRAK1P51617 712 aa27.76■■■□□ 2.03
HOXB3-201ENST00000311626 ZDHHC15Q96MV8 337 aa27.76■■■□□ 2.03
HOXB3-201ENST00000311626 INPP4AQ96PE3 977 aaPredicted RBP27.76■■■□□ 2.03
HOXB3-201ENST00000311626 RUFY1Q96T51 708 aa27.76■■■□□ 2.03
HOXB3-201ENST00000311626 TDRD3Q9H7E2 651 aaKnown RBP27.76■■■□□ 2.03
HOXB3-201ENST00000311626 ASTN1O14525 1302 aa27.76■■■□□ 2.03
HOXB3-201ENST00000311626 PITPNM2Q9BZ72 1349 aa27.76■■■□□ 2.03
HOXB3-201ENST00000311626 RAD51CO43502 376 aa27.75■■■□□ 2.03
HOXB3-201ENST00000311626 ABCB5Q2M3G0 1257 aa27.75■■■□□ 2.03
HOXB3-201ENST00000311626 SYDE2Q5VT97 1194 aa27.75■■■□□ 2.03
HOXB3-201ENST00000311626 IFT20Q8IY31 132 aa27.75■■■□□ 2.03
HOXB3-201ENST00000311626 EIF2AK1Q9BQI3 630 aaKnown RBP27.75■■■□□ 2.03
HOXB3-201ENST00000311626 AP1M1Q9BXS5 423 aa27.75■■■□□ 2.03
HOXB3-201ENST00000311626 TSKSQ9UJT2 592 aa27.75■■■□□ 2.03
HOXB3-201ENST00000311626 ATP1A2P50993 1020 aa27.75■■■□□ 2.03
HOXB3-201ENST00000311626 COG2Q14746 738 aa27.75■■■□□ 2.03
HOXB3-201ENST00000311626 EMBQ6PCB8 327 aa27.75■■■□□ 2.03
HOXB3-201ENST00000311626 EPM2AIP1Q7L775 607 aaPredicted RBP27.75■■■□□ 2.03
HOXB3-201ENST00000311626 TRAF3IP3Q9Y228 551 aa27.75■■■□□ 2.03
HOXB3-201ENST00000311626 AP3B2Q13367 1082 aa27.74■■■□□ 2.03
HOXB3-201ENST00000311626 TPH2Q8IWU9 490 aa27.74■■■□□ 2.03
HOXB3-201ENST00000311626 GDF3Q9NR23 364 aa27.74■■■□□ 2.03
HOXB3-201ENST00000311626 A0A1W2PRG0 241 aa27.74■■■□□ 2.03
HOXB3-201ENST00000311626 GNGT1P63211 74 aa27.74■■■□□ 2.03
HOXB3-201ENST00000311626 ALKBH5Q6P6C2 394 aaKnown RBP27.74■■■□□ 2.03
HOXB3-201ENST00000311626 FRMD5Q7Z6J6 570 aa27.74■■■□□ 2.03
HOXB3-201ENST00000311626 GLT8D2Q9H1C3 349 aa27.74■■■□□ 2.03
HOXB3-201ENST00000311626 VAV3Q9UKW4 847 aa27.74■■■□□ 2.03
HOXB3-201ENST00000311626 CEP104O60308 925 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 NPR1P16066 1061 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 EPHA7Q15375 998 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 RPS6KA1Q15418 735 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 SH3GL2Q99962 352 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 NAGPAQ9UK23 515 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 BCS1LQ9Y276 419 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 TMCO5BA8MYB1 307 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 PPFIA4O75335 1185 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 CCT5P48643 541 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 Q4G0T1 1027 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 PPP4R3CPQ6ZMV5 832 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 DDX42Q86XP3 938 aaKnown RBP eCLIP27.73■■■□□ 2.03
HOXB3-201ENST00000311626 TAF4BQ92750 862 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 CAPS2Q9BXY5 557 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 SIX2Q9NPC8 291 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 GCNT4Q9P109 453 aa27.73■■■□□ 2.03
HOXB3-201ENST00000311626 TBCAO75347 108 aaKnown RBP27.72■■■□□ 2.03
HOXB3-201ENST00000311626 GFPT2O94808 682 aa27.72■■■□□ 2.03
HOXB3-201ENST00000311626 CAVIN3Q969G5 261 aa27.72■■■□□ 2.03
HOXB3-201ENST00000311626 RABGAP1Q9Y3P9 1069 aa27.72■■■□□ 2.03
HOXB3-201ENST00000311626 GREB1LQ9C091 1923 aaPredicted RBP27.72■■■□□ 2.03
HOXB3-201ENST00000311626 CALUO43852 315 aaPredicted RBP27.72■■■□□ 2.03
HOXB3-201ENST00000311626 HOXA7P31268 230 aaPredicted RBP27.72■■■□□ 2.03
HOXB3-201ENST00000311626 SREBF1P36956 1147 aa27.72■■■□□ 2.03
HOXB3-201ENST00000311626 ECE1P42892 770 aa27.72■■■□□ 2.03
HOXB3-201ENST00000311626 ARHGAP27Q6ZUM4 889 aa27.72■■■□□ 2.03
HOXB3-201ENST00000311626 USP38Q8NB14 1042 aa27.72■■■□□ 2.03
HOXB3-201ENST00000311626 RASSF4Q9H2L5 321 aa27.72■■■□□ 2.03
HOXB3-201ENST00000311626 CFBP00751 764 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 SLC35C1Q96A29 364 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.71■■■□□ 2.03
HOXB3-201ENST00000311626 LRRC37AA6NMS7 1700 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 SIPA1L1O43166 1804 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 KIAA1755Q5JYT7 1200 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 COL23A1Q86Y22 540 aaPredicted RBP27.71■■■□□ 2.03
HOXB3-201ENST00000311626 MYCT1Q8N699 235 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 U2AF1L4Q8WU68 220 aaKnown RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms