RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 PFKFB1P16118 471 aa20.33■□□□□ 0.85
HMGA1-201ENST00000311487 PLCG1P19174 1290 aa20.33■□□□□ 0.85
HMGA1-201ENST00000311487 RPA1P27694 616 aa20.33■□□□□ 0.85
HMGA1-201ENST00000311487 GJA8P48165 433 aa20.33■□□□□ 0.85
HMGA1-201ENST00000311487 PSMC5P62195 406 aa20.33■□□□□ 0.85
HMGA1-201ENST00000311487 CDK5RAP3Q96JB5 506 aa20.33■□□□□ 0.85
HMGA1-201ENST00000311487 SMARCAD1Q9H4L7 1026 aa20.33■□□□□ 0.85
HMGA1-201ENST00000311487 POLR2DO15514 142 aaKnown RBP20.33■□□□□ 0.84
HMGA1-201ENST00000311487 NPEPPSP55786 919 aa20.33■□□□□ 0.84
HMGA1-201ENST00000311487 PLCB4Q15147 1175 aa20.33■□□□□ 0.84
HMGA1-201ENST00000311487 FAM160B1Q5W0V3 765 aa20.33■□□□□ 0.84
HMGA1-201ENST00000311487 HAUS3Q68CZ6 603 aa20.33■□□□□ 0.84
HMGA1-201ENST00000311487 STAMQ92783 540 aa20.33■□□□□ 0.84
HMGA1-201ENST00000311487 DHX58Q96C10 678 aa20.33■□□□□ 0.84
HMGA1-201ENST00000311487 SENP6Q9GZR1 1112 aaPredicted RBP20.33■□□□□ 0.84
HMGA1-201ENST00000311487 SEPT9Q9UHD8 586 aaPredicted RBP20.33■□□□□ 0.84
HMGA1-201ENST00000311487 FSD2A1L4K1 749 aa20.32■□□□□ 0.84
HMGA1-201ENST00000311487 KBTBD13C9JR72 458 aa20.32■□□□□ 0.84
HMGA1-201ENST00000311487 HOXD8P13378 290 aaPredicted RBP20.32■□□□□ 0.84
HMGA1-201ENST00000311487 MNX1P50219 401 aaPredicted RBP20.32■□□□□ 0.84
HMGA1-201ENST00000311487 ATN1P54259 1190 aaPredicted RBP20.32■□□□□ 0.84
HMGA1-201ENST00000311487 MFSD10Q14728 455 aa20.32■□□□□ 0.84
HMGA1-201ENST00000311487 ANO5Q75V66 913 aa20.32■□□□□ 0.84
HMGA1-201ENST00000311487 POLR3CQ9BUI4 534 aaPredicted RBP20.32■□□□□ 0.84
HMGA1-201ENST00000311487 CRISPLD2Q9H0B8 497 aa20.32■□□□□ 0.84
HMGA1-201ENST00000311487 ZSWIM4Q9H7M6 989 aa20.32■□□□□ 0.84
HMGA1-201ENST00000311487 ERAP1Q9NZ08 941 aa20.32■□□□□ 0.84
HMGA1-201ENST00000311487 WDR81Q562E7 1941 aa20.32■□□□□ 0.84
HMGA1-201ENST00000311487 MYH9P35579 1960 aaKnown RBP20.31■□□□□ 0.84
HMGA1-201ENST00000311487 A0A1W2PQ45 241 aaPredicted RBP20.31■□□□□ 0.84
HMGA1-201ENST00000311487 A0A1W2PQY0 241 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 ZEB2O60315 1214 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 SSBP05455 408 aaKnown RBP eCLIP20.31■□□□□ 0.84
HMGA1-201ENST00000311487 LIG1P18858 919 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 CMA1P23946 247 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 YWHABP31946 246 aaKnown RBP20.31■□□□□ 0.84
HMGA1-201ENST00000311487 SOX10P56693 466 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 ZNF200P98182 395 aaPredicted RBP20.31■□□□□ 0.84
HMGA1-201ENST00000311487 NBPF20Q3BBV1 942 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 FAM47CQ5HY64 1035 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 PCSK9Q8NBP7 692 aaKnown RBP20.31■□□□□ 0.84
HMGA1-201ENST00000311487 RDM1Q8NG50 284 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 ATP6V0A1Q93050 837 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 CALML4Q96GE6 196 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 ABHD8Q96I13 439 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 PCDH10Q9P2E7 1040 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 KCNH3Q9ULD8 1083 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 MORC2Q9Y6X9 1032 aaPredicted RBP20.31■□□□□ 0.84
HMGA1-201ENST00000311487 IGSF9BQ9UPX0 1349 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 CCDC85CA6NKD9 419 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 STBD1O95210 358 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 F2P00734 622 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 CST5P28325 142 aaPredicted RBP20.31■□□□□ 0.84
HMGA1-201ENST00000311487 PSEN2P49810 448 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 HIC1Q14526 733 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 CSPP1Q1MSJ5 1256 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 MTERF2Q49AM1 385 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 TMEM87AQ8NBN3 555 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 MRPS27Q92552 414 aaKnown RBP20.31■□□□□ 0.84
HMGA1-201ENST00000311487 MTG1Q9BT17 334 aaPredicted RBP20.31■□□□□ 0.84
HMGA1-201ENST00000311487 TUFT1Q9NNX1 390 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 SETD4Q9NVD3 440 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 FAM13BQ9NYF5 915 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 GRIN2DO15399 1336 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 EMSYQ7Z589 1322 aa20.31■□□□□ 0.84
HMGA1-201ENST00000311487 DNM1LO00429 736 aa20.3■□□□□ 0.84
HMGA1-201ENST00000311487 TXLNAP40222 546 aa20.3■□□□□ 0.84
HMGA1-201ENST00000311487 RAD51AP2Q09MP3 1159 aa20.3■□□□□ 0.84
HMGA1-201ENST00000311487 RRAGBQ5VZM2 374 aa20.3■□□□□ 0.84
HMGA1-201ENST00000311487 MAEAQ7L5Y9 396 aa20.3■□□□□ 0.84
HMGA1-201ENST00000311487 PLPPR4Q7Z2D5 763 aa20.3■□□□□ 0.84
HMGA1-201ENST00000311487 AFAP1L1Q8TED9 768 aa20.3■□□□□ 0.84
HMGA1-201ENST00000311487 PAWRQ96IZ0 340 aaKnown RBP20.3■□□□□ 0.84
HMGA1-201ENST00000311487 CCSER1Q9C0I3 900 aa20.3■□□□□ 0.84
HMGA1-201ENST00000311487 BHMT2Q9H2M3 363 aa20.3■□□□□ 0.84
HMGA1-201ENST00000311487 ZNF215Q9UL58 517 aaPredicted RBP20.3■□□□□ 0.84
HMGA1-201ENST00000311487 OATP04181 439 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 INSRRP14616 1297 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 NKX3-2P78367 333 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 GRAMD1CQ8IYS0 662 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 HDAC6Q9UBN7 1215 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 GOLGA6L3A6NEY3 463 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 NR1I2O75469 434 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 SMIM10L2AP0DMW4 78 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 SMIM10L2BP0DMW5 78 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 STAT6P42226 847 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 MCM6Q14566 821 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 NAALADL2Q58DX5 795 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 XKR9Q5GH70 373 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 TNS4Q8IZW8 715 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 GLT1D1Q96MS3 346 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 STARD7Q9NQZ5 370 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 CCDC39Q9UFE4 941 aa20.29■□□□□ 0.84
HMGA1-201ENST00000311487 A0A1W2PQ27 194 aa20.28■□□□□ 0.84
HMGA1-201ENST00000311487 A0A1W2PQ64 194 aa20.28■□□□□ 0.84
HMGA1-201ENST00000311487 A0A1W2PQD8 194 aa20.28■□□□□ 0.84
HMGA1-201ENST00000311487 CASP1P29466 404 aa20.28■□□□□ 0.84
HMGA1-201ENST00000311487 LONRF3Q496Y0 759 aa20.28■□□□□ 0.84
HMGA1-201ENST00000311487 TMEM119Q4V9L6 283 aa20.28■□□□□ 0.84
HMGA1-201ENST00000311487 C4orf19Q8IY42 314 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms