RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 NT5C3AQ9H0P0 336 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 MAD2L2Q9UI95 211 aa10.06□□□□□ -0.8
XCR1-201ENST00000309285 COL18A1P39060 1754 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 CNGA1P29973 690 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 APBA1Q02410 837 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 LRRC41Q15345 812 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 CC2D2BQ6DHV5 1058 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 TYW1BQ6NUM6 668 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 METTL13Q8N6R0 699 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 PLCB1Q9NQ66 1216 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 HOMER3Q9NSC5 361 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 PCDHB13Q9Y5F0 798 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 C21orf2O43822 256 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 SUN1O94901 812 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 EPHB4P54760 987 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 CYP4A11Q02928 519 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 C2orf54Q08AI8 447 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 SEPT2Q15019 361 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 SEL1L2Q5TEA6 688 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 HHATQ5VTY9 493 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 RCSD1Q6JBY9 416 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 DCUN1D2Q6PH85 259 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 SDCCAG8Q86SQ7 713 aaPredicted RBP10.05□□□□□ -0.8
XCR1-201ENST00000309285 GPBP1Q86WP2 473 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 TRIM58Q8NG06 486 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 P2RX5Q93086 422 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 DPH5Q9H2P9 285 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 INTS9Q9NV88 658 aaKnown RBP10.05□□□□□ -0.8
XCR1-201ENST00000309285 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.05□□□□□ -0.8
XCR1-201ENST00000309285 H0Y3Z8 333 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 STXBP3O00186 592 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 HNRNPCP07910 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
XCR1-201ENST00000309285 DPYDQ12882 1025 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 ARHGAP44Q17R89 818 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 LCA5Q86VQ0 697 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 ZNF513Q8N8E2 541 aaPredicted RBP10.05□□□□□ -0.8
XCR1-201ENST00000309285 USP6NLQ92738 828 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 CNOT6LQ96LI5 555 aaKnown RBP10.05□□□□□ -0.8
XCR1-201ENST00000309285 MAGEF1Q9HAY2 307 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 NLRC4Q9NPP4 1024 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 HYOU1Q9Y4L1 999 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 CSADQ9Y600 493 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 PDS5AQ29RF7 1337 aaKnown RBP10.05□□□□□ -0.8
XCR1-201ENST00000309285 TDP2O95551 362 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 RFX1P22670 979 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 RXRBP28702 533 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 CHRNA5P30532 468 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 TCP11X2Q5H9J9 407 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 MYOCDQ8IZQ8 938 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 KIFAP3Q92845 792 aa10.05□□□□□ -0.8
XCR1-201ENST00000309285 EPN1Q9Y6I3 576 aaPredicted RBP10.05□□□□□ -0.8
XCR1-201ENST00000309285 hCG_1984214I3L0E3 225 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 GH2P01242 217 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 CACNB1Q02641 598 aaPredicted RBP10.04□□□□□ -0.8
XCR1-201ENST00000309285 RPS6KA1Q15418 735 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 NBPF9Q3BBW0 867 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 FAM26FQ5R3K3 315 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 ZNF772Q68DY9 489 aaPredicted RBP10.04□□□□□ -0.8
XCR1-201ENST00000309285 ADGRF4Q8IZF3 695 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 KIRREL3Q8IZU9 778 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 ANKRD13CQ8N6S4 541 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 ZNF713Q8N859 430 aaPredicted RBP10.04□□□□□ -0.8
XCR1-201ENST00000309285 ACRBPQ8NEB7 543 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 CEP70Q8NHQ1 597 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 ZNF384Q8TF68 577 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 DHTKD1Q96HY7 919 aaPredicted RBP10.04□□□□□ -0.8
XCR1-201ENST00000309285 NUP58Q9BVL2 599 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 MRPL44Q9H9J2 332 aaKnown RBP10.04□□□□□ -0.8
XCR1-201ENST00000309285 CD248Q9HCU0 757 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 CTTNBP2NLQ9P2B4 639 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 FAM205AQ6ZU69 1335 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 MYL1P05976 194 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 PDHBP11177 359 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 SKIP12755 728 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 TNNI1P19237 187 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 AOC3Q16853 763 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 SLC9C1Q4G0N8 1177 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 CCDC84Q86UT8 332 aaPredicted RBP10.04□□□□□ -0.8
XCR1-201ENST00000309285 GSPT2Q8IYD1 628 aaKnown RBP10.04□□□□□ -0.8
XCR1-201ENST00000309285 FBXO41Q8TF61 875 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 KIF9Q9HAQ2 790 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 EPB41L5Q9HCM4 733 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 ZNF711Q9Y462 761 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 COL14A1Q05707 1796 aaKnown RBP10.04□□□□□ -0.8
XCR1-201ENST00000309285 ZBTB5O15062 677 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 ECE2O60344 883 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 EEF1GP26641 437 aaKnown RBP10.04□□□□□ -0.8
XCR1-201ENST00000309285 SLC7A5Q01650 507 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 DDR1Q08345 913 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 CDC37Q16543 378 aaPredicted RBP10.04□□□□□ -0.8
XCR1-201ENST00000309285 CDC42EP5Q6NZY7 148 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 NLRX1Q86UT6 975 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 SUGCTQ9HAC7 445 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.04□□□□□ -0.8
XCR1-201ENST00000309285 PALM3A6NDB9 673 aaPredicted RBP10.04□□□□□ -0.8
XCR1-201ENST00000309285 MYO1FO00160 1098 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 BUB1O43683 1085 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 CCNE1P24864 410 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 RWDD2BP57060 319 aa10.04□□□□□ -0.8
XCR1-201ENST00000309285 TOGARAM2Q6ZUX3 1019 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms