RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 TRIML1Q8N9V2 468 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 CNNM3Q8NE01 707 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 SCFD2Q8WU76 684 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 AFG1LQ8WV93 481 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 CLIC6Q96NY7 704 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 UBAC1Q9BSL1 405 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 FRMPD3Q5JV73 1810 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 RBM47A0AV96 593 aaKnown RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 USP27XA6NNY8 438 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 B4DLN1 442 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 CCP110O43303 1012 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 EIF2AK2P19525 551 aaKnown RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 SARSP49591 514 aaKnown RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 MRPL12P52815 198 aaKnown RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 NCBP1Q09161 790 aaKnown RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 PNOCQ13519 176 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 LONRF3Q496Y0 759 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 CT47A1Q5JQC4 288 aaPredicted RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 TJAP1Q5JTD0 557 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 GPATCH4Q5T3I0 446 aaKnown RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 ARHGEF16Q5VV41 709 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 E4F1Q66K89 784 aaPredicted RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 KANK3Q6NY19 840 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 IQCA1Q86XH1 822 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 DGKHQ86XP1 1220 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 PDCL2Q8N4E4 241 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 SYTL5Q8TDW5 730 aaPredicted RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 SYMPKQ92797 1274 aaKnown RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 ZSCAN10Q96SZ4 725 aaPredicted RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 RBM28Q9NW13 759 aaKnown RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 DACH1Q9UI36 760 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 PCDHA5Q9Y5H7 936 aa8.78□□□□□ -1
TM4SF1-201ENST00000305366 SRPRBQ9Y5M8 271 aaKnown RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 COL11A1P12107 1806 aaPredicted RBP8.78□□□□□ -1
TM4SF1-201ENST00000305366 PRPF3O43395 683 aaKnown RBP8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 BMP15O95972 392 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 CFBP00751 764 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 PARP1P09874 1014 aaKnown RBP8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 CALM1P0DP23 149 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 CALM2P0DP24 149 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 CALM3P0DP25 149 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 SNHG28P0DPA3 235 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 XBP1P17861 261 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 NT5C2P49902 561 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 FUT2Q10981 343 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 PTGISQ16647 500 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 QRICH1Q2TAL8 776 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 TMCO2Q7Z6W1 182 aaPredicted RBP8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 FCHSD1Q86WN1 690 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 FBXO11Q86XK2 927 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 SMAP1Q8IYB5 467 aaPredicted RBP8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 MLKLQ8NB16 471 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 DNERQ8NFT8 737 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 KIF18AQ8NI77 898 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 VWCEQ96DN2 955 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 RMDN3Q96TC7 470 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 TMX1Q9H3N1 280 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 COL20A1Q9P218 1284 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 PNMA2Q9UL42 364 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 EYSQ5T1H1 3165 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 LTBP2Q14767 1821 aa8.77□□□□□ -1.01
TM4SF1-201ENST00000305366 A6NJR5 290 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 NKRFO15226 690 aaKnown RBP eCLIP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 DDAH1O94760 285 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 CA3P07451 260 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 MYCLP12524 364 aaPredicted RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 CLCN6P51797 869 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 UBASH3AP57075 661 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 POSTNQ15063 836 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 VSTM4Q8IW00 320 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 STAG2Q8N3U4 1231 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 ENAHQ8N8S7 591 aaPredicted RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 SPATA20Q8TB22 786 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 ENOX1Q8TC92 643 aaKnown RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 NSUN6Q8TEA1 469 aaKnown RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 IPO4Q8TEX9 1081 aaKnown RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 ARNTL2Q8WYA1 636 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 SEZ6LQ9BYH1 1024 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 JMJD4Q9H9V9 463 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 CGNQ9P2M7 1197 aaKnown RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 MAN1B1Q9UKM7 699 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 KCNJ14Q9UNX9 436 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 VCANP13611 3396 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 CDH23Q9H251 3354 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 GREB1LQ9C091 1923 aaPredicted RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 ACTN4O43707 911 aaKnown RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 KPNA6O60684 536 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 SERPINC1P01008 464 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 GH1P01241 217 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 IQCF3P0C7M6 154 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 ACTN1P12814 892 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 ATP1A3P13637 1013 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 BMP6P22004 513 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 EDNRBP24530 442 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 HOXA13P31271 388 aaPredicted RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 MRPS5P82675 430 aaKnown RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 AKAP17AQ02040 695 aaKnown RBP8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 MORC3Q14149 939 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 STXBP2Q15833 593 aa8.76□□□□□ -1.01
TM4SF1-201ENST00000305366 PKN1Q16512 942 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms