RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 HEXIM2Q96MH2 286 aaKnown RBP15□□□□□ -0.01
PRKCB-201ENST00000303531 EPS15L1Q9UBC2 864 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 MB21D2Q8IYB1 491 aaPredicted RBP15□□□□□ -0.01
PRKCB-201ENST00000303531 PPWD1Q96BP3 646 aaKnown RBP15□□□□□ -0.01
PRKCB-201ENST00000303531 CPVLQ9H3G5 476 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 NCAPD2Q15021 1401 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 NMT2O60551 498 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 SMIM24O75264 130 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 MYO1EQ12965 1108 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 AP3B2Q13367 1082 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 TMEM47Q9BQJ4 181 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 ACTR5Q9H9F9 607 aaPredicted RBP15□□□□□ -0.01
PRKCB-201ENST00000303531 FIS1Q9Y3D6 152 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 CA4P22748 312 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 ZNF233A6NK53 670 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 SNAP23O00161 211 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 NT5C2P49902 561 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 TSTA3Q13630 321 aaPredicted RBP15□□□□□ -0.01
PRKCB-201ENST00000303531 METTL23Q86XA0 190 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 ZWILCHQ9H900 591 aa15□□□□□ -0.01
PRKCB-201ENST00000303531 ESYT2A0FGR8 921 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 SRGAP2CP0DJJ0 459 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 OSBPP22059 807 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 CCDC144BQ3MJ40 725 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 CENPUQ71F23 418 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 ENAHQ8N8S7 591 aaPredicted RBP14.99□□□□□ -0.01
PRKCB-201ENST00000303531 PYROXD1Q8WU10 500 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 LRRC4Q9HBW1 653 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 GINM1Q9NU53 330 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 UBN2Q6ZU65 1347 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 WDR19Q8NEZ3 1342 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 PRDX5P30044 214 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 GLE1Q53GS7 698 aaKnown RBP14.99□□□□□ -0.01
PRKCB-201ENST00000303531 MYLK4Q86YV6 388 aaPredicted RBP14.99□□□□□ -0.01
PRKCB-201ENST00000303531 ANGPTL3Q9Y5C1 460 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 GFPT1Q06210 699 aaPredicted RBP14.99□□□□□ -0.01
PRKCB-201ENST00000303531 SFR1Q86XK3 245 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 FOXP4Q8IVH2 680 aaPredicted RBP14.99□□□□□ -0.01
PRKCB-201ENST00000303531 PCDHA6Q9UN73 950 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 PCDHA8Q9Y5H6 950 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 SPECC1L-ADORA2AF8WAN1 911 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 K7ERI5 159 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 CDC27P30260 824 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 IL1RL1Q01638 556 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 TMEM179Q6ZVK1 233 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 DEPDC1BQ8WUY9 529 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 ATP6V1E2Q96A05 226 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 COA1Q9GZY4 146 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 TRPC5Q9UL62 973 aaPredicted RBP14.99□□□□□ -0.01
PRKCB-201ENST00000303531 THOC5Q13769 683 aaKnown RBP14.99□□□□□ -0.01
PRKCB-201ENST00000303531 HIBCHQ6NVY1 386 aaPredicted RBP14.99□□□□□ -0.01
PRKCB-201ENST00000303531 TRIM4Q9C037 500 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 QTRT2Q9H974 415 aaKnown RBP14.99□□□□□ -0.01
PRKCB-201ENST00000303531 PALLDQ8WX93 1383 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 ARHGAP31Q2M1Z3 1444 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 ZBTB5O15062 677 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 CYP27B1O15528 508 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 SLC4A1P02730 911 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 ZNF449Q6P9G9 518 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 PDIK1LQ8N165 341 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 RAD54LQ92698 747 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 SCINQ9Y6U3 715 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 SUPT20HL1Q3ZLR7 823 aa14.99□□□□□ -0.01
PRKCB-201ENST00000303531 ZBED1O96006 694 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 MX2P20592 715 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 KIF22Q14807 665 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 RNF207Q6ZRF8 634 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 RSPH3Q86UC2 560 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 ERICH1Q86X53 443 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 PROM2Q8N271 834 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 RPF1Q9H9Y2 349 aaKnown RBP14.98□□□□□ -0.01
PRKCB-201ENST00000303531 NR3C1P04150 777 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 SURF1Q15526 300 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 ANKRD20A4Q4UJ75 823 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 ANKRD20A8PQ5CZ79 823 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 ANKRD20A2Q5SQ80 823 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 ANKRD20A1Q5TYW2 823 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 NUGGCQ68CJ6 796 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 DCAF4Q8WV16 495 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 HSPH1Q92598 858 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 DIS3Q9Y2L1 958 aaKnown RBP14.98□□□□□ -0.01
PRKCB-201ENST00000303531 SNX24Q9Y343 169 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 GH2P01242 217 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 SPOPLQ6IQ16 392 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 MAML1Q92585 1016 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 OSBPL5Q9H0X9 879 aaPredicted RBP14.98□□□□□ -0.01
PRKCB-201ENST00000303531 PODXLO00592 558 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 CDO1Q16878 200 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 CC2D1AQ6P1N0 951 aaPredicted RBP14.98□□□□□ -0.01
PRKCB-201ENST00000303531 SIX6OS1Q8N1H7 587 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 FAF1Q9UNN5 650 aaPredicted RBP14.98□□□□□ -0.01
PRKCB-201ENST00000303531 PSMA2P25787 234 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 ABI1Q8IZP0 508 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 TUBB6Q9BUF5 446 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 BEGAINQ9BUH8 593 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 E9PMD0 336 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 MGEA5O60502 916 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 PDCLQ13371 301 aa14.98□□□□□ -0.01
PRKCB-201ENST00000303531 DHX40Q8IX18 779 aaKnown RBP14.98□□□□□ -0.01
PRKCB-201ENST00000303531 AP5M1Q9H0R1 490 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms