RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 MMS19Q96T76 1030 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 JPH2Q9BR39 696 aaPredicted RBP20.86■□□□□ 0.93
TSR1-201ENST00000301364 VIPAS39Q9H9C1 493 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 GIPC1O14908 333 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 PDIA5Q14554 519 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 IRX2Q9BZI1 471 aaPredicted RBP20.86■□□□□ 0.93
TSR1-201ENST00000301364 CLRN2A0PK11 232 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 ZKSCAN8Q15776 578 aaPredicted RBP20.86■□□□□ 0.93
TSR1-201ENST00000301364 CDKL2Q92772 493 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 FUCA2Q9BTY2 467 aa20.86■□□□□ 0.93
TSR1-201ENST00000301364 HOXA13P31271 388 aaPredicted RBP20.85■□□□□ 0.93
TSR1-201ENST00000301364 PRKG1Q13976 671 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 C12orf60Q5U649 245 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 TTBK2Q6IQ55 1244 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 NEURL4Q96JN8 1562 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 ARHGAP42A6NI28 874 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 SPATA4Q8NEY3 305 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 IFT122Q9HBG6 1241 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 CSADQ9Y600 493 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 TFDP1Q14186 410 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 ANKRD40Q6AI12 368 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 SRGNP10124 158 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 PDXDC1Q6P996 788 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 CD2APQ9Y5K6 639 aa20.85■□□□□ 0.93
TSR1-201ENST00000301364 RHOBTB3O94955 611 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 ARHGAP4P98171 946 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 TXNDC9O14530 226 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 SBK1Q52WX2 424 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 DNAJC24Q6P3W2 148 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 GBP7Q8N8V2 638 aaPredicted RBP20.84■□□□□ 0.93
TSR1-201ENST00000301364 NSUN4Q96CB9 384 aaKnown RBP20.84■□□□□ 0.93
TSR1-201ENST00000301364 TMEM260Q9NX78 707 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 SEL1LQ9UBV2 794 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 SNX12Q9UMY4 172 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 HPS5Q9UPZ3 1129 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 KRT1P04264 644 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 FXR1P51114 621 aaKnown RBP eCLIP20.84■□□□□ 0.93
TSR1-201ENST00000301364 TMED2Q15363 201 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 MIS18BP1Q6P0N0 1132 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 TXLNGQ9NUQ3 528 aa20.84■□□□□ 0.93
TSR1-201ENST00000301364 POTEB3A0JP26 581 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 POTECB2RU33 542 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 USP17L15C9J2P7 530 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 USP17L13C9JLJ4 530 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 USP17L11C9JVI0 530 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 USP17L18D6R9N7 530 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 USP17L22D6RA61 530 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 USP17L17D6RBQ6 530 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 USP17L19D6RCP7 530 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 USP17L20D6RJB6 530 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 NPR1P16066 1061 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 USP17L24Q0WX57 530 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 USP17L6PQ6QN14 398 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 POTEBQ6S5H4 581 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 RFX6Q8HWS3 928 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 NSMCE1Q8WV22 266 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.83■□□□□ 0.931e-6■■□□□ 12.6
TSR1-201ENST00000301364 TAF1DQ9H5J8 278 aaPredicted RBP20.83■□□□□ 0.93
TSR1-201ENST00000301364 COL3A1P02461 1466 aaPredicted RBP20.83■□□□□ 0.93
TSR1-201ENST00000301364 FCER1AP12319 257 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 GSPT2Q8IYD1 628 aaKnown RBP20.83■□□□□ 0.93
TSR1-201ENST00000301364 CFAP61Q8NHU2 1237 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 CHP1Q99653 195 aa20.83■□□□□ 0.93
TSR1-201ENST00000301364 MSH2P43246 934 aa20.83■□□□□ 0.92
TSR1-201ENST00000301364 USP11P51784 963 aa20.83■□□□□ 0.92
TSR1-201ENST00000301364 GPC5P78333 572 aa20.83■□□□□ 0.92
TSR1-201ENST00000301364 TRIM68Q6AZZ1 485 aa20.83■□□□□ 0.92
TSR1-201ENST00000301364 HACE1Q8IYU2 909 aa20.83■□□□□ 0.92
TSR1-201ENST00000301364 GBP5Q96PP8 586 aa20.83■□□□□ 0.92
TSR1-201ENST00000301364 SFI1A8K8P3 1242 aa20.83■□□□□ 0.92
TSR1-201ENST00000301364 HIBCHQ6NVY1 386 aaPredicted RBP20.83■□□□□ 0.92
TSR1-201ENST00000301364 STAG2Q8N3U4 1231 aa20.83■□□□□ 0.92
TSR1-201ENST00000301364 PIGOQ8TEQ8 1089 aa20.83■□□□□ 0.92
TSR1-201ENST00000301364 EXOC1LA0A1B0GW35 172 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 FAM205CA6NFA0 338 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 ANKRD36BP1Q96IX9 119 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 GPR101Q96P66 508 aaPredicted RBP20.82■□□□□ 0.92
TSR1-201ENST00000301364 TUBB6Q9BUF5 446 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 SNX24Q9Y343 169 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 MAD1L1Q9Y6D9 718 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 MMS22LQ6ZRQ5 1243 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 EXOC8Q8IYI6 725 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.82■□□□□ 0.92
TSR1-201ENST00000301364 C7orf25Q9BPX7 421 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 SLITRK6Q9H5Y7 841 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 SCINQ9Y6U3 715 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 XXYLT1Q8NBI6 393 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 USP17L10C9JJH3 530 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 NCK2O43639 380 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 PRELPP51888 382 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 SH3BGRP55822 239 aaPredicted RBP20.82■□□□□ 0.92
TSR1-201ENST00000301364 LLGL1Q15334 1064 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 TAF12Q16514 161 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 RAD9BQ6WBX8 426 aa20.82■□□□□ 0.92
TSR1-201ENST00000301364 SSU72P8A0A1W2PR75 194 aa20.81■□□□□ 0.92
TSR1-201ENST00000301364 ZNF233A6NK53 670 aa20.81■□□□□ 0.92
TSR1-201ENST00000301364 MCF2LO15068 1137 aa20.81■□□□□ 0.92
TSR1-201ENST00000301364 SORBS3O60504 671 aa20.81■□□□□ 0.92
TSR1-201ENST00000301364 CCND2P30279 289 aa20.81■□□□□ 0.92
TSR1-201ENST00000301364 RCSD1Q6JBY9 416 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms