RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 MARCH6O60337 910 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 LGR5O75473 907 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 CREB1P16220 341 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 ATP2A2P16615 1042 aaKnown RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 ABL2P42684 1182 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 NEK9Q8TD19 979 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 U2AF1L4Q8WU68 220 aaKnown RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 ATXN2LQ8WWM7 1075 aaKnown RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 RNF25Q96BH1 459 aaPredicted RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 NUCKS1Q9H1E3 243 aaKnown RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 SLC5A4Q9NY91 659 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 RTCBQ9Y3I0 505 aaKnown RBP11.94□□□□□ -0.5
SNX20-201ENST00000300590 MROH5Q6ZUA9 1318 aa11.94□□□□□ -0.5
SNX20-201ENST00000300590 USP17L3A6NCW0 530 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 USP17L4A6NCW7 530 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 CFAP73A6NFT4 308 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 LACTBP83111 547 aaPredicted RBP11.93□□□□□ -0.5
SNX20-201ENST00000300590 ATP11AP98196 1134 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 FKBP3Q00688 224 aaKnown RBP11.93□□□□□ -0.5
SNX20-201ENST00000300590 ZNF268Q14587 947 aaPredicted RBP11.93□□□□□ -0.5
SNX20-201ENST00000300590 USP17L1Q7RTZ2 530 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 KCNK18Q7Z418 384 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 PIGWQ7Z7B1 504 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 MYOCDQ8IZQ8 938 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 TLCD1Q96CP7 247 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 DAAM1Q9Y4D1 1078 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 KLHL33A6NCF5 533 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 RBAK-RBAKDNI3L0D1 243 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 LRP6O75581 1613 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 MSH2P43246 934 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 CTCFP49711 727 aaPredicted RBP11.93□□□□□ -0.5
SNX20-201ENST00000300590 ADCY2Q08462 1091 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 AADACL2Q6P093 401 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 UNC13DQ70J99 1090 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 PKD1L3Q7Z443 1732 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 GUF1Q8N442 669 aaKnown RBP11.93□□□□□ -0.5
SNX20-201ENST00000300590 CCHCR1Q8TD31 782 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 ACTRT1Q8TDG2 376 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 DYNLL2Q96FJ2 89 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 RIOK1Q9BRS2 568 aaKnown RBP11.93□□□□□ -0.5
SNX20-201ENST00000300590 NSRP1Q9H0G5 558 aaKnown RBP11.93□□□□□ -0.5
SNX20-201ENST00000300590 ADAM7Q9H2U9 754 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 OSGEPQ9NPF4 335 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 FAM114A2Q9NRY5 505 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 BLOC1S4Q9NUP1 217 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 TMEM260Q9NX78 707 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 ARPP21Q9UBL0 812 aaPredicted RBP11.93□□□□□ -0.5
SNX20-201ENST00000300590 SMCO2A6NFE2 343 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 CCDC169A6NNP5 214 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 ASAP2O43150 1006 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 SNUPNO95149 360 aaKnown RBP11.93□□□□□ -0.5
SNX20-201ENST00000300590 LINGO3P0C6S8 592 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 CCND1P24385 295 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 DR1Q01658 176 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 GRB10Q13322 594 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 DCAF17Q5H9S7 520 aaPredicted RBP11.93□□□□□ -0.5
SNX20-201ENST00000300590 TPCN2Q8NHX9 752 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 SNX29Q8TEQ0 813 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 CUEDC2Q9H467 287 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 DNAJC17Q9NVM6 304 aaKnown RBP11.93□□□□□ -0.5
SNX20-201ENST00000300590 MCM9Q9NXL9 1143 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 TMOD3Q9NYL9 352 aa11.93□□□□□ -0.5
SNX20-201ENST00000300590 DPPA5A6NC42 116 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 CYTH3O43739 400 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 GSTA1P08263 222 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 PPP1R2P41236 205 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 MXRA7P84157 204 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 GJB7Q6PEY0 223 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNX20-201ENST00000300590 ANAPC4Q9UJX5 808 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 NAGPAQ9UK23 515 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 ZMYND8Q9ULU4 1186 aaPredicted RBP11.92□□□□□ -0.5
SNX20-201ENST00000300590 G3BP2Q9UN86 482 aaKnown RBP11.92□□□□□ -0.5
SNX20-201ENST00000300590 NPHP3-ACAD11A0A0J9YXS1 232 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 CCDC188H7C350 402 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 SNX3O60493 162 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 USP17L8P0C7I0 530 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 GNAT1P11488 350 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 LRRC63Q05C16 580 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 RIPK1Q13546 671 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 ITIH4Q14624 930 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 NONOQ15233 471 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNX20-201ENST00000300590 TSC22D3Q99576 134 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 PAIP2Q9BPZ3 127 aaKnown RBP11.92□□□□□ -0.5
SNX20-201ENST00000300590 ETNK1Q9HBU6 452 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 TMOD4Q9NZQ9 345 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 ADAM22Q9P0K1 906 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 PTPN22Q9Y2R2 807 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 RGPD5Q99666 1765 aa11.92□□□□□ -0.5
SNX20-201ENST00000300590 TMEM110-MUSTN1A8MSY1 372 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 STARD3NLO95772 234 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 IGHMBP2P38935 993 aaKnown RBP11.91□□□□□ -0.5
SNX20-201ENST00000300590 EIF3BP55884 814 aaKnown RBP11.91□□□□□ -0.5
SNX20-201ENST00000300590 RWDD2BP57060 319 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 COPS2P61201 443 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 KCNH2Q12809 1159 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 LONRF1Q17RB8 773 aa11.91□□□□□ -0.5
SNX20-201ENST00000300590 NAF1Q96HR8 494 aaKnown RBP11.91□□□□□ -0.5
SNX20-201ENST00000300590 PIDD1Q9HB75 910 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms