RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 BBOF1Q8ND07 529 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 CHAMP1Q96JM3 812 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 PCDHA10Q9Y5I2 948 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 CETPP11597 493 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 GTF2A1P52655 376 aaPredicted RBP19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 ZNF568Q3ZCX4 644 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 CCDC68Q9H2F9 335 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 VCPKMTQ9H867 229 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 INPP5FQ9Y2H2 1132 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 PREX1Q8TCU6 1659 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 ZBBXA8MT70 800 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 TXNP10599 105 aaKnown RBP19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 LMNB2Q03252 620 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 OR6B2Q6IFH4 312 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 EBAG9O00559 213 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 CDC27P30260 824 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 ARL4AP40617 200 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 OR6B3Q8NGW1 331 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 PLCB1Q9NQ66 1216 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 XXYLT1Q8NBI6 393 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 URGCPQ8TCY9 931 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 SEL1LQ9UBV2 794 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 DDX41Q9UJV9 622 aaKnown RBP19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 EIF3CLB5ME19 914 aaKnown RBP19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 PDIA6Q15084 440 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 PLCB4Q15147 1175 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 CEP55Q53EZ4 464 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 DENND2CQ68D51 928 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 EIF3CQ99613 913 aaKnown RBP19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 GINM1Q9NU53 330 aa19.18■□□□□ 0.66
CDC42EP3-201ENST00000295324 PXDNLA1KZ92 1463 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 PVALEFA0A1B0GWK0 134 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 MAN1A1P33908 653 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 RASSF7Q02833 373 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 TSGA10IPQ3SY00 556 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 RESP18Q5W5W9 173 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 ANKRD13CQ8N6S4 541 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 GJB4Q9NTQ9 266 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 SLC9A2Q9UBY0 812 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 CTNND1O60716 968 aaKnown RBP19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 KAZNQ674X7 775 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 TYW1Q9NV66 732 aaKnown RBP19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 IPO11Q9UI26 975 aaKnown RBP19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 GOLGA8CPA6NN73 597 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 NDST4Q9H3R1 872 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 SLC10A5Q5PT55 438 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 RFX6Q8HWS3 928 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 RAD54LQ92698 747 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 RSPH14Q9UHP6 348 aa19.17■□□□□ 0.66
CDC42EP3-201ENST00000295324 SLC25A27O95847 323 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 SAMD7Q7Z3H4 446 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 SFR1Q86XK3 245 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 RHPN2Q8IUC4 686 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 BEST2Q8NFU1 509 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 GFPT2O94808 682 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 VPS41P49754 854 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 MMP14P50281 582 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 MUM1L1Q5H9M0 696 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 C4orf50Q6ZRC1 276 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 C16orf86Q6ZW13 317 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 GPR75-ASB3A0A0A6YYF3 556 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 CCL15-CCL14A0A0B4J2E2 113 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 KRT10P13645 584 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 EPHA7Q15375 998 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 CCL15Q16663 113 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 SCARA5Q6ZMJ2 495 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 RUNDC3BQ96NL0 473 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 E9PMD0 336 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 RIOK3O14730 519 aaKnown RBP19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 STAG2Q8N3U4 1231 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 OXER1Q8TDS5 423 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 ALDH8A1Q9H2A2 487 aaPredicted RBP19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 A6NNZ2 444 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 CELF2O95319 508 aaKnown RBP19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 SREBF2Q12772 1141 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 PTPROQ16827 1216 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 TUBB8Q3ZCM7 444 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 USP32Q8NFA0 1604 aa19.16■□□□□ 0.66
CDC42EP3-201ENST00000295324 ZBED6P86452 979 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 LXNQ9BS40 222 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 SLITRK6Q9H5Y7 841 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 HUS1O60921 280 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 POTEB3A0JP26 581 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 POTECB2RU33 542 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 I3L4J1 428 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 SRGAP2BP0DMP2 458 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 POTEBQ6S5H4 581 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 LRRC8AQ8IWT6 810 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 RYBPQ8N488 228 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 OR6J1Q8NGC5 347 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 JPH1Q9HDC5 661 aaPredicted RBP19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 EHHADHQ08426 723 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 TSC1Q92574 1164 aa19.15■□□□□ 0.66
CDC42EP3-201ENST00000295324 KDM4FA0A1W2PPD8 638 aa19.14■□□□□ 0.66
CDC42EP3-201ENST00000295324 BAATQ14032 418 aaPredicted RBP19.14■□□□□ 0.66
CDC42EP3-201ENST00000295324 SLC8A2Q9UPR5 921 aa19.14■□□□□ 0.66
CDC42EP3-201ENST00000295324 SLC16A4O15374 487 aa19.14■□□□□ 0.65
CDC42EP3-201ENST00000295324 CIITAP33076 1130 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms