RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 EPHX2P34913 555 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 MDH1P40925 334 aaKnown RBP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 JAM2P57087 298 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 PTGISQ16647 500 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 LACTB2Q53H82 288 aaPredicted RBP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 FAM26FQ5R3K3 315 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 KRT26Q7Z3Y9 468 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 SLFN12Q8IYM2 578 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 HDAC7Q8WUI4 952 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 CDK5RAP3Q96JB5 506 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 PCMTD1Q96MG8 357 aaPredicted RBP6.76□□□□□ -1.33
VCAM1-201ENST00000294728 SIPA1L1O43166 1804 aa6.76□□□□□ -1.33
VCAM1-201ENST00000294728 HEXIM1O94992 359 aaKnown RBP6.75□□□□□ -1.33
VCAM1-201ENST00000294728 GLI1P08151 1106 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 SLC1A4P43007 532 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 MMP14P50281 582 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 AP3B2Q13367 1082 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 IRF2BP2Q7Z5L9 587 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 CCDC50Q8IVM0 306 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 TMEM109Q9BVC6 243 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 TXLNGYQ9BZA5 131 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 MMRN2Q9H8L6 949 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 CNOT10Q9H9A5 744 aaKnown RBP6.75□□□□□ -1.33
VCAM1-201ENST00000294728 SLC39A2Q9NP94 309 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 USP20Q9Y2K6 914 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 COL2A1P02458 1487 aaPredicted RBP6.75□□□□□ -1.33
VCAM1-201ENST00000294728 USP17L3A6NCW0 530 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 USP17L4A6NCW7 530 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 TMCO5BA8MYB1 307 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 KIF4AO95239 1232 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 GHRP10912 638 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 NR1D1P20393 614 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 ATP2B4P23634 1241 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 INPP5BP32019 993 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 MRPL12P52815 198 aaKnown RBP6.75□□□□□ -1.33
VCAM1-201ENST00000294728 SMTNP53814 917 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 RHBDL3P58872 404 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 MYBPC2Q14324 1141 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 Q4G0T1 1027 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 SMYD5Q6GMV2 418 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 USP17L1Q7RTZ2 530 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 RIN2Q8WYP3 895 aaPredicted RBP6.75□□□□□ -1.33
VCAM1-201ENST00000294728 HAS1Q92839 578 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 ARL8AQ96BM9 186 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 SETDB2Q96T68 719 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.75□□□□□ -1.33
VCAM1-201ENST00000294728 MKNK1Q9BUB5 465 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 EHD4Q9H223 541 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 FAM114A2Q9NRY5 505 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 FAM207AQ9NSI2 230 aaPredicted RBP6.75□□□□□ -1.33
VCAM1-201ENST00000294728 MTMR4Q9NYA4 1195 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 SLC12A6Q9UHW9 1150 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 PES1O00541 588 aaKnown RBP6.75□□□□□ -1.33
VCAM1-201ENST00000294728 NPM3O75607 178 aaKnown RBP6.75□□□□□ -1.33
VCAM1-201ENST00000294728 PALMO75781 387 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 NPR1P16066 1061 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 KLRK1P26718 216 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 ECE1P42892 770 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 CCT5P48643 541 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 EVX2Q03828 476 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 GFPT1Q06210 699 aaPredicted RBP6.75□□□□□ -1.33
VCAM1-201ENST00000294728 ASIC2Q16515 512 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 CRY2Q49AN0 593 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 GPC2Q8N158 579 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 CNBD1Q8NA66 436 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 SNX29Q8TEQ0 813 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 CASKIN2Q8WXE0 1202 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 CUL5Q93034 780 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 MKL1Q969V6 931 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 HES6Q96HZ4 224 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 CCDC134Q9H6E4 229 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 PANK4Q9NVE7 773 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 TFR2Q9UP52 801 aa6.75□□□□□ -1.33
VCAM1-201ENST00000294728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.75□□□□□ -1.33
VCAM1-201ENST00000294728 COL4A5P29400 1685 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 PGRMC1O00264 195 aaKnown RBP6.74□□□□□ -1.33
VCAM1-201ENST00000294728 CETN3O15182 167 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 EIF3DO15371 548 aaKnown RBP eCLIP6.74□□□□□ -1.33
VCAM1-201ENST00000294728 FLOT1O75955 427 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 NUDT17P0C025 328 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 SLC12A3P55017 1021 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 POU5F1Q01860 360 aaKnown RBP6.74□□□□□ -1.33
VCAM1-201ENST00000294728 ZNF543Q08ER8 600 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 RPS6KA1Q15418 735 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 NAA35Q5VZE5 725 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 MAATS1Q7Z4T9 603 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 RTKN2Q8IZC4 609 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 HHIPL1Q96JK4 782 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 NAP1L3Q99457 506 aaPredicted RBP6.74□□□□□ -1.33
VCAM1-201ENST00000294728 MRIQ9BWK5 157 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 VCPKMTQ9H867 229 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 OLFML3Q9NRN5 406 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 TLL2Q9Y6L7 1015 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 NDUFAB1O14561 156 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 PMM2O15305 246 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 SART1O43290 800 aaKnown RBP6.74□□□□□ -1.33
VCAM1-201ENST00000294728 CA12O43570 354 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 TRAPPC3O43617 180 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 SLC37A4O43826 429 aa6.74□□□□□ -1.33
VCAM1-201ENST00000294728 CALUO43852 315 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms