RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 LRP6O75581 1613 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 COPB1P53618 953 aaKnown RBP12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 MUM1L1Q5H9M0 696 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 SH3GLB2Q9NR46 395 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 HARSP12081 509 aaKnown RBP12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 POLGP54098 1239 aaPredicted RBP12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 MYO1EQ12965 1108 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 PSMD6Q15008 389 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 KCNV1Q6PIU1 500 aa12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.35□□□□□ -0.43
NPC1L1-201ENST00000289547 MYL3P08590 195 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 CXCR5P32302 372 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 SLC7A5Q01650 507 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 EHHADHQ08426 723 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 CLUL1Q15846 466 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 FKBP1CQ5VVH2 108 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 CNPY4Q8N129 248 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 CFAP61Q8NHU2 1237 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 EEF2KMTQ96G04 330 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 KIF2CQ99661 725 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 VCPKMTQ9H867 229 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 CALUO43852 315 aaPredicted RBP12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 PSAPP07602 524 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 TROVE2P10155 538 aaKnown RBP eCLIP12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 IFNAR1P17181 557 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 NBPF9Q3BBW0 867 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 FAM193BQ96PV7 902 aaPredicted RBP12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 COBLO75128 1261 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 EIF2AK2P19525 551 aaKnown RBP12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 MRPS25P82663 173 aaKnown RBP12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 DACT2Q5SW24 774 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 SYCE1Q8N0S2 351 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 NLGN2Q8NFZ4 835 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 GEMIN8Q9NWZ8 242 aaKnown RBP12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 ERCC5P28715 1186 aaPredicted RBP12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 ELF1P32519 619 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 FKBP1BP68106 108 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 IGBP1P78318 339 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 SLC39A14Q15043 492 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 MYCT1Q8N699 235 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 RMDN3Q96TC7 470 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 NUDT12Q9BQG2 462 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 GLIS2Q9BZE0 524 aaPredicted RBP12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 SAMSN1Q9NSI8 373 aaKnown RBP12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 CTTNBP2NLQ9P2B4 639 aa12.34□□□□□ -0.43
NPC1L1-201ENST00000289547 SORBS3O60504 671 aa12.33□□□□□ -0.43
NPC1L1-201ENST00000289547 TPD52P55327 224 aaPredicted RBP12.33□□□□□ -0.43
NPC1L1-201ENST00000289547 INHBEP58166 350 aa12.33□□□□□ -0.43
NPC1L1-201ENST00000289547 GRM4Q14833 912 aa12.33□□□□□ -0.43
NPC1L1-201ENST00000289547 TOGARAM2Q6ZUX3 1019 aa12.33□□□□□ -0.43
NPC1L1-201ENST00000289547 SLC17A8Q8NDX2 589 aa12.33□□□□□ -0.43
NPC1L1-201ENST00000289547 SH3GL3Q99963 347 aa12.33□□□□□ -0.43
NPC1L1-201ENST00000289547 LRFN2Q9ULH4 789 aa12.33□□□□□ -0.43
NPC1L1-201ENST00000289547 PPP1R9AQ9ULJ8 1098 aa12.33□□□□□ -0.43
NPC1L1-201ENST00000289547 CAPRIN2Q6IMN6 1127 aaKnown RBP12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 TBC1D10CQ8IV04 446 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 LINC00301Q8NCQ3 95 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 SUGCTQ9HAC7 445 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 KLC4Q9NSK0 619 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 NOVA2Q9UNW9 492 aaKnown RBP12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 CASP7P55210 303 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 SLMAPQ14BN4 828 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 ADAT2Q7Z6V5 191 aaKnown RBP12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 MSANTD4Q8NCY6 345 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 SLC7A3Q8WY07 619 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 KBTBD13C9JR72 458 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 PPFIA2O75334 1257 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 CAP2P40123 477 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 RESTQ13127 1097 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 FAM102BQ5T8I3 360 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 FAM167BQ9BTA0 163 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 NUCKS1Q9H1E3 243 aaKnown RBP12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 MTMR4Q9NYA4 1195 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 PARP2Q9UGN5 583 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 AMFRQ9UKV5 643 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 NEDD4P46934 1319 aa12.33□□□□□ -0.44
NPC1L1-201ENST00000289547 WNT10BO00744 389 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 ABCD1P33897 745 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 ABI1Q8IZP0 508 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 IQCDQ96DY2 449 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 FAM170AA1A519 330 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 ARHGAP42A6NI28 874 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 MAEAQ7L5Y9 396 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 CCHCR1Q8TD31 782 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 CDCA5Q96FF9 252 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 FAM167AQ96KS9 214 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 MRIQ9BWK5 157 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 SYNCQ9H7C4 482 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 PHRF1Q9P1Y6 1649 aaKnown RBP12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 BTBD18B2RXH4 712 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 RANBP1P43487 201 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 YARSP54577 528 aaKnown RBP12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 SLC8A3P57103 927 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 TRPC3Q13507 836 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 DEFB115Q30KQ5 88 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 WDR44Q5JSH3 913 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 EMBQ6PCB8 327 aa12.32□□□□□ -0.44
NPC1L1-201ENST00000289547 NSUN7Q8NE18 718 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms