RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 AFAP1L1Q8TED9 768 aa10.41□□□□□ -0.74
HMGN1-201ENST00000288344 HAS1Q92839 578 aa10.41□□□□□ -0.74
HMGN1-201ENST00000288344 OSBPL7Q9BZF2 842 aa10.41□□□□□ -0.74
HMGN1-201ENST00000288344 EHMT1Q9H9B1 1298 aa10.41□□□□□ -0.74
HMGN1-201ENST00000288344 JPH1Q9HDC5 661 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-201ENST00000288344 SLC9A2Q9UBY0 812 aa10.41□□□□□ -0.74
HMGN1-201ENST00000288344 MAFBQ9Y5Q3 323 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-201ENST00000288344 SCN5AQ14524 2016 aa10.41□□□□□ -0.74
HMGN1-201ENST00000288344 TRANK1O15050 2925 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 SLC37A4O43826 429 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 TDP2O95551 362 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 IQCF3P0C7M6 154 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 CSF2RAP15509 400 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 RAG1P15918 1043 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 MBTPS1Q14703 1052 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 PTGISQ16647 500 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 PRR16Q569H4 304 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 KRT25Q7Z3Z0 450 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 TDHQ8IZJ6 230 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 TTC13Q8NBP0 860 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 CEP89Q96ST8 783 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 RIT2Q99578 217 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 KATNAL1Q9BW62 490 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 HIPK3Q9H422 1215 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 TBC1D22BQ9NU19 505 aa10.4□□□□□ -0.74
HMGN1-201ENST00000288344 KAT6AQ92794 2004 aa10.4□□□□□ -0.75
HMGN1-201ENST00000288344 REV3LO60673 3130 aa10.4□□□□□ -0.75
HMGN1-201ENST00000288344 A0A0C4DFX4 3053 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 TLR3O15455 904 aaKnown RBP10.39□□□□□ -0.75
HMGN1-201ENST00000288344 TREHO43280 583 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 CXCL10P02778 98 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 SMIM10L2AP0DMW4 78 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 SMIM10L2BP0DMW5 78 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 U2AF2P26368 475 aaKnown RBP eCLIP10.39□□□□□ -0.758e-8■■■■■ 35
HMGN1-201ENST00000288344 SETQ01105 290 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-201ENST00000288344 SPIRE1Q08AE8 756 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 PTK7Q13308 1070 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 PLCB4Q15147 1175 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 NONOQ15233 471 aaKnown RBP eCLIP10.39□□□□□ -0.75
HMGN1-201ENST00000288344 INF2Q27J81 1249 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 TCTN1Q2MV58 587 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 FAM26DQ5JW98 314 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 ZNF746Q6NUN9 644 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-201ENST00000288344 CCDC60Q8IWA6 550 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-201ENST00000288344 WASF1Q92558 559 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 GJA10Q969M2 543 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 MTMR9Q96QG7 549 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.39□□□□□ -0.754e-7■■■□□ 15.1
HMGN1-201ENST00000288344 ZNF577Q9BSK1 485 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 ADAM33Q9BZ11 813 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 UBE2OQ9C0C9 1292 aaKnown RBP10.39□□□□□ -0.75
HMGN1-201ENST00000288344 SMARCAD1Q9H4L7 1026 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 PRDM5Q9NQX1 630 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-201ENST00000288344 SETD4Q9NVD3 440 aa10.39□□□□□ -0.75
HMGN1-201ENST00000288344 ZNF862O60290 1169 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 CKBP12277 381 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 FPGSQ05932 587 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 PIK3AP1Q6ZUJ8 805 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 DIS3L2Q8IYB7 885 aaKnown RBP10.38□□□□□ -0.75
HMGN1-201ENST00000288344 C7orf31Q8N865 590 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 C4orf32Q8N8J7 132 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 ZNF454Q8N9F8 522 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 LMBR1Q8WVP7 490 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 UIMC1Q96RL1 719 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 PPP1R12CQ9BZL4 782 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 IL23AQ9NPF7 189 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 ERAP1Q9NZ08 941 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 PKD2L1Q9P0L9 805 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 VAV3Q9UKW4 847 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 MYH9P35579 1960 aaKnown RBP10.38□□□□□ -0.75
HMGN1-201ENST00000288344 NRCAMQ92823 1304 aa10.38□□□□□ -0.75
HMGN1-201ENST00000288344 KIF28PB7ZC32 967 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 EML1O00423 815 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 NOP56O00567 594 aaKnown RBP10.37□□□□□ -0.75
HMGN1-201ENST00000288344 TBX3O15119 743 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 NBNO60934 754 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 INSRRP14616 1297 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 KRT2P35908 639 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 ZNF76P36508 570 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 MCM2P49736 904 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 SLC26A2P50443 739 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 TOB1P50616 345 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-201ENST00000288344 STAT5BP51692 787 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 CCL23P55773 120 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 HMGN5P82970 282 aaKnown RBP10.37□□□□□ -0.75
HMGN1-201ENST00000288344 SP4Q02446 784 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 TARBP2Q15633 366 aaKnown RBP10.37□□□□□ -0.75
HMGN1-201ENST00000288344 ZNF618Q5T7W0 954 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 UTP14CQ5TAP6 766 aaKnown RBP10.37□□□□□ -0.75
HMGN1-201ENST00000288344 ZNF365Q70YC5 407 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 NEK8Q86SG6 692 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 SMAP1Q8IYB5 467 aaPredicted RBP10.37□□□□□ -0.75
HMGN1-201ENST00000288344 LINC01465Q8N7H1 131 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 CAGE1Q8TC20 777 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 HERVK_113Q902F9 699 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 SCLYQ96I15 445 aa10.37□□□□□ -0.75
HMGN1-201ENST00000288344 LBHD1Q9BQE6 289 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms