RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 BCRP11274 1271 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 ALDH1B1P30837 517 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 CYP2C19P33261 490 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 USP37Q86T82 979 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 ZNF446Q9NWS9 450 aa13.62□□□□□ -0.23
SLC6A1-201ENST00000287766 RGPD8O14715 1765 aaPredicted RBP13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 GH2P01242 217 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 POLR2MP0CAP2 368 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 NR1D1P20393 614 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 SYCE1Q8N0S2 351 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 SH2D3AQ9BRG2 576 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 IRAK4Q9NWZ3 460 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 UBR1Q8IWV7 1749 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 QRICH1Q2TAL8 776 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 FERMT1Q9BQL6 677 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 FAM167BQ9BTA0 163 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 ZBTB5O15062 677 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 RHOBTB3O94955 611 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 SRGNP10124 158 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 TAB3Q8N5C8 712 aaPredicted RBP13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 CCDC17Q96LX7 622 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 VPS37BQ9H9H4 285 aa13.61□□□□□ -0.23
SLC6A1-201ENST00000287766 TROVE2P10155 538 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 ACTN1P12814 892 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 SMTNP53814 917 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 MYO1EQ12965 1108 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 KCNB1Q14721 858 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 TMED8Q6PL24 325 aaPredicted RBP13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 GIMAP8Q8ND71 665 aaPredicted RBP13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 SPATA4Q8NEY3 305 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 PPP1R9AQ9ULJ8 1098 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 GJA3Q9Y6H8 435 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 A0A1W2PQC6 194 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 RAD17O75943 681 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 BMP3P12645 472 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 GCFC2P16383 781 aaKnown RBP13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 SLCO1A2P46721 670 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 PLTPP55058 493 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 TDRD3Q9H7E2 651 aaKnown RBP13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 METTL14Q9HCE5 456 aaKnown RBP13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 FLT1P17948 1338 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 XKR9Q5GH70 373 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 FBXW10Q5XX13 1052 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 LRRC43Q8N309 656 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 FUT8Q9BYC5 575 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 IMPG2Q9BZV3 1241 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 MAD2L2Q9UI95 211 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 NOVA2Q9UNW9 492 aaKnown RBP13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 GOLGA8IPA6NC78 632 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 GOLGA8JA6NMD2 632 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 PPFIA2O75334 1257 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 SARSP49591 514 aaKnown RBP13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 APBA1Q02410 837 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 VCX3AQ9NNX9 186 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 SUFUQ9UMX1 484 aa13.6□□□□□ -0.23
SLC6A1-201ENST00000287766 ABL1P00519 1130 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 IFNB1P01574 187 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 MDM2Q00987 491 aaPredicted RBP13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 SBK1Q52WX2 424 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 PDXDC2PQ6P474 469 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 GUF1Q8N442 669 aaKnown RBP13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 SH2D3CQ8N5H7 860 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 COG1Q8WTW3 980 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 ZNF577Q9BSK1 485 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 DDX47Q9H0S4 455 aaKnown RBP13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 RGL1Q9NZL6 768 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 H0Y3Z8 333 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 NDC80O14777 642 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 TNNI1P19237 187 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 ARHGAP4P98171 946 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 LARSQ9P2J5 1176 aaKnown RBP13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 PVALEFA0A1B0GWK0 134 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 SASH3O75995 380 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 DHX9Q08211 1270 aaKnown RBP13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 CDKAL1Q5VV42 579 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 DNAAF5Q86Y56 855 aa13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 MAGOHBQ96A72 148 aaKnown RBP13.59□□□□□ -0.23
SLC6A1-201ENST00000287766 SLC37A4O43826 429 aa13.58□□□□□ -0.23
SLC6A1-201ENST00000287766 PSMD2Q13200 908 aa13.58□□□□□ -0.23
SLC6A1-201ENST00000287766 WDR44Q5JSH3 913 aa13.58□□□□□ -0.23
SLC6A1-201ENST00000287766 ARMC2Q8NEN0 867 aa13.58□□□□□ -0.23
SLC6A1-201ENST00000287766 CHURC1Q8WUH1 139 aa13.58□□□□□ -0.23
SLC6A1-201ENST00000287766 DNAJC17Q9NVM6 304 aaKnown RBP13.58□□□□□ -0.23
SLC6A1-201ENST00000287766 MTMR4Q9NYA4 1195 aa13.58□□□□□ -0.23
SLC6A1-201ENST00000287766 SCOCQ9UIL1 159 aa13.58□□□□□ -0.23
SLC6A1-201ENST00000287766 DAGLAQ9Y4D2 1042 aa13.58□□□□□ -0.23
SLC6A1-201ENST00000287766 PGRMC1O00264 195 aaKnown RBP13.58□□□□□ -0.24
SLC6A1-201ENST00000287766 ZNF211Q13398 564 aaPredicted RBP13.58□□□□□ -0.24
SLC6A1-201ENST00000287766 SNX1Q13596 522 aa13.58□□□□□ -0.24
SLC6A1-201ENST00000287766 CCDC13Q8IYE1 715 aa13.58□□□□□ -0.24
SLC6A1-201ENST00000287766 JDP2Q8WYK2 163 aa13.58□□□□□ -0.24
SLC6A1-201ENST00000287766 RIC1Q4ADV7 1423 aa13.58□□□□□ -0.24
SLC6A1-201ENST00000287766 ITIH6Q6UXX5 1313 aa13.58□□□□□ -0.24
SLC6A1-201ENST00000287766 H3BQF6 201 aa13.58□□□□□ -0.24
SLC6A1-201ENST00000287766 PSMC2P35998 433 aaKnown RBP13.58□□□□□ -0.24
SLC6A1-201ENST00000287766 MYL7Q01449 175 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms