RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 HHIPQ96QV1 700 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 MDFIQ99750 246 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 NOL10Q9BSC4 688 aaKnown RBP3.3□□□□□ -1.88
HERC4-201ENST00000277817 TBC1D22BQ9NU19 505 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 ZBTB40Q9NUA8 1239 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 L1RE1Q9UN81 338 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 PARP3Q9Y6F1 533 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 RNF123Q5XPI4 1314 aa3.3□□□□□ -1.88
HERC4-201ENST00000277817 TISP43B9A030 160 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 B9A039 149 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 CBX4O00257 560 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 PPFIA3O75145 1194 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 RAD52P43351 418 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 IREB2P48200 963 aaKnown RBP3.29□□□□□ -1.88
HERC4-201ENST00000277817 ZC3H12AQ5D1E8 599 aaKnown RBP3.29□□□□□ -1.88
HERC4-201ENST00000277817 SLC35F1Q5T1Q4 408 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 ARMC3Q5W041 872 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 LHX8Q68G74 356 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 OLFM4Q6UX06 510 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 OTOP1Q7RTM1 612 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 KCNH5Q8NCM2 988 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 ZIC5Q96T25 663 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 SLC9A7Q96T83 725 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 MYD88Q99836 296 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 KIAA1586Q9HCI6 787 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 GMIPQ9P107 970 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 HPS5Q9UPZ3 1129 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 OTOFQ9HC10 1997 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 PTPRCP08575 1304 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 CCDC85CA6NKD9 419 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 ADH1AP07327 375 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 XRCC6P12956 609 aaKnown RBP eCLIP3.29□□□□□ -1.88
HERC4-201ENST00000277817 PCSK2P16519 638 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 LSSP48449 732 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 PRKG2Q13237 762 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.29□□□□□ -1.88
HERC4-201ENST00000277817 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.29□□□□□ -1.88
HERC4-201ENST00000277817 ZNF396Q96N95 335 aaPredicted RBP3.29□□□□□ -1.88
HERC4-201ENST00000277817 GPR101Q96P66 508 aaPredicted RBP3.29□□□□□ -1.88
HERC4-201ENST00000277817 LRFN3Q9BTN0 628 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 PANK2Q9BZ23 570 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 EFCC1Q9HA90 598 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 AASDHPPTQ9NRN7 309 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 ARHGAP28Q9P2N2 729 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 DBF4Q9UBU7 674 aaPredicted RBP3.29□□□□□ -1.88
HERC4-201ENST00000277817 GIMAP2Q9UG22 337 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 FBXO2Q9UK22 296 aaPredicted RBP3.29□□□□□ -1.88
HERC4-201ENST00000277817 PHIPQ8WWQ0 1821 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 ANKRD36BQ8N2N9 1353 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 M0R2C6 588 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 TOR1BO14657 336 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 TBX1O43435 398 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 CD4P01730 458 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 RPS6KB1P23443 525 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 FCGRTP55899 365 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 DHX9Q08211 1270 aaKnown RBP3.29□□□□□ -1.88
HERC4-201ENST00000277817 EIF4A2Q14240 407 aaKnown RBP3.29□□□□□ -1.88
HERC4-201ENST00000277817 SART3Q15020 963 aaKnown RBP3.29□□□□□ -1.88
HERC4-201ENST00000277817 PPP1R26Q5T8A7 1209 aaPredicted RBP3.29□□□□□ -1.88
HERC4-201ENST00000277817 SWSAP1Q6NVH7 229 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 MILR1Q7Z6M3 343 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 DNAJC5GQ8N7S2 189 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 MNS1Q8NEH6 495 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 ZMIZ2Q8NF64 920 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 ANKRD20A12PQ8NF67 263 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 ATL2Q8NHH9 583 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 TMEM120AQ9BXJ8 343 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.29□□□□□ -1.88
HERC4-201ENST00000277817 LIMCH1Q9UPQ0 1083 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 STXBP5LQ9Y2K9 1186 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 MAP3K2Q9Y2U5 619 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 A0A0G2JMZ2 1700 aa3.29□□□□□ -1.88
HERC4-201ENST00000277817 DLX3O60479 287 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 IDH1O75874 414 aaKnown RBP3.28□□□□□ -1.88
HERC4-201ENST00000277817 IPO7O95373 1038 aaKnown RBP3.28□□□□□ -1.88
HERC4-201ENST00000277817 TPM2P07951 284 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 PABPC1P11940 636 aaKnown RBP3.28□□□□□ -1.88
HERC4-201ENST00000277817 NME2P22392 152 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 PDE1AP54750 535 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 PHC1P78364 1004 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 MTHFSDQ2M296 383 aaKnown RBP3.28□□□□□ -1.88
HERC4-201ENST00000277817 ANKRD39Q53RE8 183 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 CDCA2Q69YH5 1023 aaPredicted RBP3.28□□□□□ -1.88
HERC4-201ENST00000277817 ANKRD44Q8N8A2 993 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 KCT2Q8NC54 265 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 RHBDD1Q8TEB9 315 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 NUP133Q8WUM0 1156 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 LMBR1Q8WVP7 490 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 RPGRQ92834 1020 aaKnown RBP3.28□□□□□ -1.88
HERC4-201ENST00000277817 MARVELD3Q96A59 401 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 TMX3Q96JJ7 454 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 AGBL1Q96MI9 1066 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 COLEC11Q9BWP8 271 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 NUP62CLQ9H1M0 184 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 ATP6V0A4Q9HBG4 840 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 ECHDC1Q9NTX5 307 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 NKIRAS2Q9NYR9 191 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 CFAP45Q9UL16 551 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 USP20Q9Y2K6 914 aa3.28□□□□□ -1.88
HERC4-201ENST00000277817 HIF3AQ9Y2N7 669 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms