RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 LCP1P13796 627 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 SNRNP48Q6IEG0 339 aaKnown RBP21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 HEMGNQ9BXL5 484 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 SCAF8Q9UPN6 1271 aaKnown RBP21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 PROSER3Q2NL68 480 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 ANTXR1Q9H6X2 564 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 SP110Q9HB58 689 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 SLC7A5Q01650 507 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 BBOF1Q8ND07 529 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 TDRD3Q9H7E2 651 aaKnown RBP21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 MFSD14CQ5VZR4 134 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 EPB41L5Q9HCM4 733 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 FARP1Q9Y4F1 1045 aaPredicted RBP21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 FOSP01100 380 aaPredicted RBP21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 PPARGP37231 505 aaPredicted RBP21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 UBE3AQ05086 875 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 MAGEB10Q96LZ2 347 aaPredicted RBP21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 KIAA1468Q9P260 1216 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 GNAT1P11488 350 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 EEF1DP29692 281 aaKnown RBP21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 RASIP1Q5U651 963 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 ATG16L1Q676U5 607 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 ZSCAN32Q9NX65 697 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 ZNF568Q3ZCX4 644 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 MCTP2Q6DN12 878 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 CCDC124Q96CT7 223 aaKnown RBP21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 INTS9Q9NV88 658 aaKnown RBP21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 C11orf96Q7Z7L8 435 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 SLC26A7Q8TE54 656 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 ZNF608Q9ULD9 1512 aaPredicted RBP21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 SLC10A5Q5PT55 438 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 CYFIP1Q7L576 1253 aa21.84■■□□□ 1.09
CACNA1B-201ENST00000277549 GRIK1P39086 918 aa21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 RASSF3Q86WH2 238 aa21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 AGR3Q8TD06 166 aa21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 SEC31AO94979 1220 aaKnown RBP21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 HSPA4LO95757 839 aa21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 LONP1P36776 959 aaKnown RBP21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 SLC17A8Q8NDX2 589 aa21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 ULK4Q96C45 1275 aa21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 HOXD10P28358 340 aa21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 SH3RF3Q8TEJ3 882 aaPredicted RBP21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 LEMD3Q9Y2U8 911 aa21.83■■□□□ 1.09
CACNA1B-201ENST00000277549 ANKRD40Q6AI12 368 aa21.83■■□□□ 1.08
CACNA1B-201ENST00000277549 PCDHA7Q9UN72 937 aa21.83■■□□□ 1.08
CACNA1B-201ENST00000277549 EAF2Q96CJ1 260 aaPredicted RBP21.83■■□□□ 1.08
CACNA1B-201ENST00000277549 CPVLQ9H3G5 476 aa21.83■■□□□ 1.08
CACNA1B-201ENST00000277549 SUPT3HB4E1H0 165 aa21.83■■□□□ 1.08
CACNA1B-201ENST00000277549 KANSL2Q9H9L4 492 aa21.83■■□□□ 1.08
CACNA1B-201ENST00000277549 SERPINB13Q9UIV8 391 aa21.83■■□□□ 1.08
CACNA1B-201ENST00000277549 HUS1O60921 280 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 MFSD4BQ5TF39 518 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 ERLEC1Q96DZ1 483 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 ZBTB18Q99592 522 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 PI4KBQ9UBF8 816 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 RSPH10B2B2RC85 870 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 RSPH10BP0C881 870 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 PLA2G4BP0C869 781 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 TMEM62Q0P6H9 643 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 WHAMMP3Q1A5X7 153 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 ARHGEF37A1IGU5 675 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 CLCN1P35523 988 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 KCNJ6P48051 423 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 SMYD3Q9H7B4 428 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 ELP3Q9H9T3 547 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 SPTLC3Q9NUV7 552 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 PAMP19021 973 aa21.82■■□□□ 1.08
CACNA1B-201ENST00000277549 GAP43P17677 238 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 GCKP35557 465 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 CFAP65Q6ZU64 1925 aaKnown RBP21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 SETSIPP0DME0 302 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 SOX11P35716 441 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 EN1Q05925 392 aaPredicted RBP21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 FLOT2Q14254 428 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 STXBP2Q15833 593 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 SPATA33Q96N06 139 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 MTMR1Q13613 665 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 FAM213AQ9BRX8 229 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 TMEM206Q9H813 350 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 VGLL3A8MV65 326 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 M0QYV0 167 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 ECE2O60344 883 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 PCCAP05165 728 aaPredicted RBP21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 GPC3P51654 580 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 PARVGQ9HBI0 331 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 PCSK1NQ9UHG2 260 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 F8W8V4 182 aa21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 GPATCH4Q5T3I0 446 aaKnown RBP21.81■■□□□ 1.08
CACNA1B-201ENST00000277549 DUOX2Q9NRD8 1548 aa21.8■■□□□ 1.08
CACNA1B-201ENST00000277549 BRD1O95696 1058 aa21.8■■□□□ 1.08
CACNA1B-201ENST00000277549 RC3H1Q5TC82 1133 aaKnown RBP21.8■■□□□ 1.08
CACNA1B-201ENST00000277549 WDR11Q9BZH6 1224 aa21.8■■□□□ 1.08
CACNA1B-201ENST00000277549 EIF3CLB5ME19 914 aaKnown RBP21.8■■□□□ 1.08
CACNA1B-201ENST00000277549 ACSL3O95573 720 aa21.8■■□□□ 1.08
CACNA1B-201ENST00000277549 EIF3CQ99613 913 aaKnown RBP21.8■■□□□ 1.08
CACNA1B-201ENST00000277549 ZNF518AQ6AHZ1 1483 aa21.8■■□□□ 1.08
CACNA1B-201ENST00000277549 LMNB2Q03252 620 aa21.8■■□□□ 1.08
CACNA1B-201ENST00000277549 TMED1Q13445 227 aa21.8■■□□□ 1.08
CACNA1B-201ENST00000277549 COL17A1Q9UMD9 1497 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms