RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 MAGEC3Q8TD91 643 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 CDK5RAP3Q96JB5 506 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 ADAM22Q9P0K1 906 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 hCG_2014768A0A024R1R8 64 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 LRRD1A4D1F6 860 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 RFC5P40937 340 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 NAB2Q15742 525 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 TMEM154Q6P9G4 183 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 ZNF662Q6ZS27 426 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.94□□□□□ -0.18
HERC6-202ENST00000273960 ANKS1AQ92625 1134 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 MRRFQ96E11 262 aaKnown RBP13.94□□□□□ -0.18
HERC6-202ENST00000273960 RNF41Q9H4P4 317 aaPredicted RBP13.94□□□□□ -0.18
HERC6-202ENST00000273960 LUC7LQ9NQ29 371 aaKnown RBP13.94□□□□□ -0.18
HERC6-202ENST00000273960 BIN2Q9UBW5 565 aaPredicted RBP13.94□□□□□ -0.18
HERC6-202ENST00000273960 MAN2A1Q16706 1144 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 TBC1D9BQ66K14 1250 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 HGSNATQ68CP4 663 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 LRIG3Q6UXM1 1119 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 ZNF572Q7Z3I7 529 aaPredicted RBP13.94□□□□□ -0.18
HERC6-202ENST00000273960 RPS6KC1Q96S38 1066 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 ZMYND12Q9H0C1 365 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 SEMA4AQ9H3S1 761 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 METTL5Q9NRN9 209 aaKnown RBP13.94□□□□□ -0.18
HERC6-202ENST00000273960 TSKSQ9UJT2 592 aa13.94□□□□□ -0.18
HERC6-202ENST00000273960 C4AP0C0L4 1744 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 C4BP0C0L5 1744 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 LAMB3Q13751 1172 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 NBPF20Q3BBV1 942 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 EAPPQ56P03 285 aaPredicted RBP13.93□□□□□ -0.18
HERC6-202ENST00000273960 RFX8Q6ZV50 586 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 CCDC84Q86UT8 332 aaPredicted RBP13.93□□□□□ -0.18
HERC6-202ENST00000273960 ZNF34Q8IZ26 560 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 LINC00116Q8NCU8 138 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 C2CD2Q9Y426 696 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 MROH5Q6ZUA9 1318 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 USP17L12C9JPN9 530 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 USP17L21D6R901 530 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 CAMTA2O94983 1202 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 ACSL3O95573 720 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 CYP2D6P10635 497 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 KCNMA1Q12791 1236 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 CUL1Q13616 776 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 ASIC2Q16515 512 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 LONRF1Q17RB8 773 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 PARP10Q53GL7 1025 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 PPP1R15BQ5SWA1 713 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 TMTC3Q6ZXV5 915 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 ZNF317Q96PQ6 595 aaPredicted RBP13.93□□□□□ -0.18
HERC6-202ENST00000273960 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.93□□□□□ -0.18
HERC6-202ENST00000273960 INTUQ9ULD6 942 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 BCL9O00512 1426 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 ALS2Q96Q42 1657 aa13.93□□□□□ -0.18
HERC6-202ENST00000273960 C5orf60A6NFR6 353 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 ERVV-1B6SEH8 477 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 FUT2Q10981 343 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 MTMR3Q13615 1198 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 MIGA2Q7L4E1 593 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 SLC51AQ86UW1 340 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 FBXO25Q8TCJ0 367 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 TNFRSF25Q93038 417 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 SLC12A4Q9UP95 1085 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 SEC23AQ15436 765 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 VSIG1Q86XK7 387 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 RPUSD2Q8IZ73 545 aaKnown RBP13.92□□□□□ -0.18
HERC6-202ENST00000273960 TRIM4Q9C037 500 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 TMOD4Q9NZQ9 345 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 BCS1LQ9Y276 419 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 MYH7BA7E2Y1 1941 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 MAGEB6P1A0A0J9YX57 407 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 TSPY2A6NKD2 308 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 GH1P01241 217 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 GHRP10912 638 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 KLRK1P26718 216 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 CNGA1P29973 690 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 PTK2Q05397 1052 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 TROAPQ12815 778 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 BLMHQ13867 455 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 AGBL2Q5U5Z8 902 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 DZIP1Q86YF9 867 aaKnown RBP13.92□□□□□ -0.18
HERC6-202ENST00000273960 CNBD1Q8NA66 436 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 U2AF1L4Q8WU68 220 aaKnown RBP13.92□□□□□ -0.18
HERC6-202ENST00000273960 CORO1CQ9ULV4 474 aaPredicted RBP13.92□□□□□ -0.18
HERC6-202ENST00000273960 PCDHGC5Q9Y5F6 944 aa13.92□□□□□ -0.18
HERC6-202ENST00000273960 CCND1P24385 295 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 RNF10Q8N5U6 811 aaKnown RBP13.91□□□□□ -0.18
HERC6-202ENST00000273960 B4GALNT2Q8NHY0 566 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 RUBCNQ92622 972 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 RMDN2Q96LZ7 410 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 SYT15Q9BQS2 421 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 CDCA7Q9BWT1 371 aaPredicted RBP13.91□□□□□ -0.18
HERC6-202ENST00000273960 UBA5Q9GZZ9 404 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 CTNNAL1Q9UBT7 734 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 RTL9Q8NET4 1388 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 MARCH6O60337 910 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 TARSP26639 723 aaKnown RBP13.91□□□□□ -0.18
HERC6-202ENST00000273960 PMS2P54278 862 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 COPS2P61201 443 aa13.91□□□□□ -0.18
HERC6-202ENST00000273960 DCAF17Q5H9S7 520 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms