RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 CCDC17Q96LX7 622 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 NIF3L1Q9GZT8 377 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 ZNF576Q9H609 170 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 ATP8A2Q9NTI2 1148 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 NAV1Q8NEY1 1877 aa11.62□□□□□ -0.55
LRTM1-201ENST00000273286 ZNF532Q9HCE3 1301 aa11.61□□□□□ -0.55
LRTM1-201ENST00000273286 MPHOSPH10O00566 681 aaKnown RBP11.61□□□□□ -0.55
LRTM1-201ENST00000273286 SPINK2P20155 84 aa11.61□□□□□ -0.55
LRTM1-201ENST00000273286 CCND3P30281 292 aaPredicted RBP11.61□□□□□ -0.55
LRTM1-201ENST00000273286 SOX4Q06945 474 aaPredicted RBP11.61□□□□□ -0.55
LRTM1-201ENST00000273286 CCL14Q16627 93 aa11.61□□□□□ -0.55
LRTM1-201ENST00000273286 OLFML2BQ68BL8 750 aa11.61□□□□□ -0.55
LRTM1-201ENST00000273286 CDPF1Q6NVV7 123 aa11.61□□□□□ -0.55
LRTM1-201ENST00000273286 ABRAQ8N0Z2 381 aa11.61□□□□□ -0.55
LRTM1-201ENST00000273286 FBXL6Q8N531 539 aa11.61□□□□□ -0.55
LRTM1-201ENST00000273286 ACER1Q8TDN7 264 aa11.61□□□□□ -0.55
LRTM1-201ENST00000273286 FBLIM1Q8WUP2 373 aa11.61□□□□□ -0.55
LRTM1-201ENST00000273286 IL1RAPL2Q9NP60 686 aa11.61□□□□□ -0.55
LRTM1-201ENST00000273286 DCP1AQ9NPI6 582 aaPredicted RBP11.61□□□□□ -0.55
LRTM1-201ENST00000273286 DDX20Q9UHI6 824 aaKnown RBP11.61□□□□□ -0.55
LRTM1-201ENST00000273286 ZMYND8Q9ULU4 1186 aaPredicted RBP11.61□□□□□ -0.55
LRTM1-201ENST00000273286 ZNF236Q9UL36 1845 aa11.61□□□□□ -0.55
LRTM1-201ENST00000273286 FAM95CA0A1B0GW59 222 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 DNM1LO00429 736 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 GOLIM4O00461 696 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 EIF1AYO14602 144 aaKnown RBP11.6□□□□□ -0.55
LRTM1-201ENST00000273286 PEX10O60683 326 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 ADH5P11766 374 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 MAGEA10P43363 369 aaPredicted RBP11.6□□□□□ -0.55
LRTM1-201ENST00000273286 SEPT2Q15019 361 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 NFKBIBQ15653 356 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 DPP9Q86TI2 863 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 ARRDC4Q8NCT1 418 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 GIMAP7Q8NHV1 300 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 CCDC74AQ96AQ1 378 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 DNAJC2Q99543 621 aaKnown RBP11.6□□□□□ -0.55
LRTM1-201ENST00000273286 TRIM56Q9BRZ2 755 aaKnown RBP11.6□□□□□ -0.55
LRTM1-201ENST00000273286 TANGO6Q9C0B7 1094 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 MROH8Q9H579 483 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 BTBD7Q9P203 1132 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 PRKAG2Q9UGJ0 569 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 TCRBV5S4A2TA0A5A2 114 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 B3GALT4O96024 378 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 IGHA2P01877 340 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 SYN1P17600 705 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 ITPKAP23677 461 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 GUCY1A2P33402 732 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 HP1BP3Q5SSJ5 553 aaPredicted RBP11.6□□□□□ -0.55
LRTM1-201ENST00000273286 ZSCAN25Q6NSZ9 544 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 PAOXQ6QHF9 649 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 PANK1Q8TE04 598 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 SPATC1LQ9H0A9 340 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 DNAJC25Q9H1X3 360 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 PAG1Q9NWQ8 432 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 TMX2Q9Y320 296 aa11.6□□□□□ -0.55
LRTM1-201ENST00000273286 GADD45BO75293 160 aaPredicted RBP11.59□□□□□ -0.55
LRTM1-201ENST00000273286 CYBAP13498 195 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 ATP5JP18859 108 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 ADORA2AP29274 412 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 CNGA1P29973 690 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 ADD2P35612 726 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 ICA1Q05084 483 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 UBE3CQ15386 1083 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 SLC17A8Q8NDX2 589 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 SDR42E1Q8WUS8 393 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 LBHD1Q9BQE6 289 aaPredicted RBP11.59□□□□□ -0.55
LRTM1-201ENST00000273286 CORO1BQ9BR76 489 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 YIPF2Q9BWQ6 316 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 MOV10L1Q9BXT6 1211 aaKnown RBP11.59□□□□□ -0.55
LRTM1-201ENST00000273286 ABCB6Q9NP58 842 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 ZBTB40Q9NUA8 1239 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 NRBP1Q9UHY1 535 aa11.59□□□□□ -0.55
LRTM1-201ENST00000273286 A0A0G2JMZ2 1700 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 MYH8P13535 1937 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 A0A1W2PRG0 241 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 KBTBD13C9JR72 458 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 WDR46O15213 610 aaKnown RBP11.58□□□□□ -0.56
LRTM1-201ENST00000273286 FLOT1O75955 427 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 ECEL1O95672 775 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 SLC25A27O95847 323 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 F13BP05160 661 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 ERCC3P19447 782 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 COPB2P35606 906 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 LRRC26Q2I0M4 334 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 LCORLQ8N3X6 602 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 DMRTB1Q96MA1 342 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 SENP6Q9GZR1 1112 aaPredicted RBP11.58□□□□□ -0.56
LRTM1-201ENST00000273286 VCPKMTQ9H867 229 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 KANSL2Q9H9L4 492 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 FLRT1Q9NZU1 646 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 FRMPD3Q5JV73 1810 aa11.58□□□□□ -0.56
LRTM1-201ENST00000273286 SEPT4O43236 478 aa11.57□□□□□ -0.56
LRTM1-201ENST00000273286 FCER1AP12319 257 aa11.57□□□□□ -0.56
LRTM1-201ENST00000273286 CYP2C19P33261 490 aa11.57□□□□□ -0.56
LRTM1-201ENST00000273286 GP2P55259 537 aaKnown RBP11.57□□□□□ -0.56
LRTM1-201ENST00000273286 C12orf60Q5U649 245 aa11.57□□□□□ -0.56
LRTM1-201ENST00000273286 DTX1Q86Y01 620 aa11.57□□□□□ -0.56
LRTM1-201ENST00000273286 DEFB123Q8N688 67 aa11.57□□□□□ -0.56
LRTM1-201ENST00000273286 NPLOC4Q8TAT6 608 aa11.57□□□□□ -0.56
LRTM1-201ENST00000273286 HAUS7Q99871 368 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms