RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 RIT2Q99578 217 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 BCAS3Q9H6U6 928 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 SLC38A10Q9HBR0 1119 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 CEP72Q9P209 647 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 COL20A1Q9P218 1284 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 CCPG1Q9ULG6 757 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 TFR2Q9UP52 801 aa13.11□□□□□ -0.31
CDKL3-201ENST00000265334 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDKL3-201ENST00000265334 USP2O75604 605 aaPredicted RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 ITGB5P18084 799 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 NR2F2P24468 414 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 ZNF131P52739 623 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 TUBB4BP68371 445 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 PAPD7Q5XG87 772 aaKnown RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 HGSNATQ68CP4 663 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 USP50Q70EL3 339 aaPredicted RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 RRAGAQ7L523 313 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 TRAPPC11Q7Z392 1133 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 KRT26Q7Z3Y9 468 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 KIAA1328Q86T90 577 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 SULF1Q8IWU6 871 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 TPH2Q8IWU9 490 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 ZC3H15Q8WU90 426 aaKnown RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 ZNF577Q9BSK1 485 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 UNC45AQ9H3U1 944 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 TYW1Q9NV66 732 aaKnown RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 PPP1R9AQ9ULJ8 1098 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 ZHX2Q9Y6X8 837 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 RLFQ13129 1914 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 FRMPD4Q14CM0 1322 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 SSU72P8A0A1W2PR75 194 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 IPO5O00410 1097 aaKnown RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 NFIBO00712 420 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 PRPF6O94906 941 aaKnown RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 EIF4A3P38919 411 aaKnown RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 CHMP4BP1P59074 171 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 CYP27A1Q02318 531 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 TEX35Q5T0J7 233 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 SAMD3Q8N6K7 520 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 EHBP1Q8NDI1 1231 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 NACC1Q96RE7 527 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 FIZ1Q96SL8 496 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 TANGO6Q9C0B7 1094 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 NUCKS1Q9H1E3 243 aaKnown RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 EPC1Q9H2F5 836 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 RPAP3Q9H6T3 665 aaPredicted RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 WRAP73Q9P2S5 460 aaPredicted RBP13.1□□□□□ -0.31
CDKL3-201ENST00000265334 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
CDKL3-201ENST00000265334 ASTN1O14525 1302 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 ZBTB39O15060 712 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 EIF3DO15371 548 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDKL3-201ENST00000265334 CALUO43852 315 aaPredicted RBP13.09□□□□□ -0.31
CDKL3-201ENST00000265334 TLR2O60603 784 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 TBCAO75347 108 aaKnown RBP13.09□□□□□ -0.31
CDKL3-201ENST00000265334 IPO7O95373 1038 aaKnown RBP13.09□□□□□ -0.31
CDKL3-201ENST00000265334 KIF11P52732 1056 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 KCNH2Q12809 1159 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 NFIL3Q16649 462 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 TEKT3Q9BXF9 490 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 GANQ9H2C0 597 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 MAP3K20Q9NYL2 800 aaKnown RBP13.09□□□□□ -0.31
CDKL3-201ENST00000265334 KCND2Q9NZV8 630 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 FZD1Q9UP38 647 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 RBAK-RBAKDNI3L0D1 243 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 DHX15O43143 795 aaKnown RBP13.09□□□□□ -0.31
CDKL3-201ENST00000265334 PJA2O43164 708 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 TGFB1I1O43294 461 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 CHMP2AO43633 222 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 FLOT1O75955 427 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 TFRCP02786 760 aaKnown RBP13.09□□□□□ -0.31
CDKL3-201ENST00000265334 CBX1P83916 185 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 DGKZQ13574 1117 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 SPA17Q15506 151 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 MCF2L2Q86YR7 1114 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 IL31RAQ8NI17 732 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 NEK9Q8TD19 979 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 ZFP91Q96JP5 570 aaPredicted RBP13.09□□□□□ -0.31
CDKL3-201ENST00000265334 TSGA10Q9BZW7 698 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 ARGLU1Q9NWB6 273 aaPredicted RBP13.09□□□□□ -0.31
CDKL3-201ENST00000265334 SEL1LQ9UBV2 794 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 AFG3L2Q9Y4W6 797 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 PCDHA13Q9Y5I0 950 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 UBIAD1Q9Y5Z9 338 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 DUSP10Q9Y6W6 482 aa13.09□□□□□ -0.31
CDKL3-201ENST00000265334 SCN4AP35499 1836 aa13.08□□□□□ -0.32
CDKL3-201ENST00000265334 ZMYM2Q9UBW7 1377 aa13.08□□□□□ -0.32
CDKL3-201ENST00000265334 SLC16A3O15427 465 aaKnown RBP13.08□□□□□ -0.32
CDKL3-201ENST00000265334 NR3C1P04150 777 aa13.08□□□□□ -0.32
CDKL3-201ENST00000265334 KIF5AQ12840 1032 aa13.08□□□□□ -0.32
CDKL3-201ENST00000265334 PCNX4Q63HM2 1172 aa13.08□□□□□ -0.32
CDKL3-201ENST00000265334 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
CDKL3-201ENST00000265334 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.08□□□□□ -0.32
CDKL3-201ENST00000265334 CACNA2D4Q7Z3S7 1137 aa13.08□□□□□ -0.32
CDKL3-201ENST00000265334 MSANTD4Q8NCY6 345 aa13.08□□□□□ -0.32
CDKL3-201ENST00000265334 BORCS6Q96GS4 357 aa13.08□□□□□ -0.32
CDKL3-201ENST00000265334 LSM14BQ9BX40 385 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms