RNA–Protein interactions for RNA: ENST00000264331.8

TOP2B-201, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TOP2B, Length 5,358 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-201ENST00000264331 ZBED3Q96IU2 234 aaPredicted RBP6.91□□□□□ -1.3
TOP2B-201ENST00000264331 CNOT6LQ96LI5 555 aaKnown RBP6.91□□□□□ -1.3
TOP2B-201ENST00000264331 CEP89Q96ST8 783 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 MMRN2Q9H8L6 949 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 NBPF19A0A087WUL8 3843 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 CENPEQ02224 2701 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 TMCO5BA8MYB1 307 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 I6L893 689 aaPredicted RBP6.91□□□□□ -1.3
TOP2B-201ENST00000264331 DDX3XO00571 662 aaKnown RBP eCLIP6.91□□□□□ -1.36e-9■■■□□ 14.8
TOP2B-201ENST00000264331 SOCS7O14512 581 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 BYSLQ13895 437 aaKnown RBP6.91□□□□□ -1.3
TOP2B-201ENST00000264331 SYCP2LQ5T4T6 812 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 TRNP1Q6NT89 227 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 EPM2AIP1Q7L775 607 aaPredicted RBP6.91□□□□□ -1.3
TOP2B-201ENST00000264331 DGKHQ86XP1 1220 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 PPP1R16BQ96T49 567 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 GANQ9H2C0 597 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 LIMA1Q9UHB6 759 aaKnown RBP6.91□□□□□ -1.3
TOP2B-201ENST00000264331 GGA1Q9UJY5 639 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 MORC2Q9Y6X9 1032 aaPredicted RBP6.91□□□□□ -1.3
TOP2B-201ENST00000264331 MPHOSPH10O00566 681 aaKnown RBP6.91□□□□□ -1.3
TOP2B-201ENST00000264331 MAP3K13O43283 966 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 SHBGP04278 402 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 PTPN14Q15678 1187 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 SPATA1Q5VX52 437 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 EEPD1Q7L9B9 569 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 TP53INP2Q8IXH6 220 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 CPXCR1Q8N123 301 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 GRIN2DO15399 1336 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 F8W810 466 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 MAP2K7O14733 419 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 BANF1O75531 89 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 MATR3P43243 847 aaKnown RBP eCLIP6.91□□□□□ -1.31e-6■■■■□ 20.7
TOP2B-201ENST00000264331 DNAJC21Q5F1R6 531 aaKnown RBP6.91□□□□□ -1.3
TOP2B-201ENST00000264331 SH3PXD2AQ5TCZ1 1133 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 SFR1Q86XK3 245 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 ZSCAN29Q8IWY8 852 aaPredicted RBP6.91□□□□□ -1.3
TOP2B-201ENST00000264331 SLC35C1Q96A29 364 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 KREMEN1Q96MU8 473 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.91□□□□□ -1.34e-7■■□□□ 12
TOP2B-201ENST00000264331 TMEM30AQ9NV96 361 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 ANO10Q9NW15 660 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 PCDHA3Q9Y5H8 950 aa6.91□□□□□ -1.3
TOP2B-201ENST00000264331 NDUFA10O95299 355 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 NAPAP54920 295 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 R3HDM1Q15032 1099 aaKnown RBP6.9□□□□□ -1.3
TOP2B-201ENST00000264331 CDC37Q16543 378 aaPredicted RBP6.9□□□□□ -1.3
TOP2B-201ENST00000264331 TMEM119Q4V9L6 283 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 EAPPQ56P03 285 aaPredicted RBP6.9□□□□□ -1.3
TOP2B-201ENST00000264331 RILPL1Q5EBL4 403 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 PDCL2Q8N4E4 241 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 RABGGTAQ92696 567 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 TAAR1Q96RJ0 339 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 PCYT2Q99447 389 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 JPH2Q9BR39 696 aaPredicted RBP6.9□□□□□ -1.3
TOP2B-201ENST00000264331 CCDC94Q9BW85 323 aaPredicted RBP6.9□□□□□ -1.3
TOP2B-201ENST00000264331 XPNPEP1Q9NQW7 623 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 PPP1R1BQ9UD71 204 aaPredicted RBP6.9□□□□□ -1.3
TOP2B-201ENST00000264331 CEP131Q9UPN4 1083 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 LRRC37A2A6NM11 1700 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 ZBTB42B2RXF5 422 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 TOP3BO95985 862 aaKnown RBP6.9□□□□□ -1.3
TOP2B-201ENST00000264331 EIF4A3P38919 411 aaKnown RBP6.9□□□□□ -1.3
TOP2B-201ENST00000264331 HNRNPH2P55795 449 aaKnown RBP6.9□□□□□ -1.3
TOP2B-201ENST00000264331 COASYQ13057 564 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 TRDNQ13061 729 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 TTF1Q15361 905 aaPredicted RBP6.9□□□□□ -1.3
TOP2B-201ENST00000264331 MEA1Q16626 185 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 CYFIP1Q7L576 1253 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 CSRNP1Q96S65 589 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 ALPK2Q86TB3 2170 aa6.9□□□□□ -1.3
TOP2B-201ENST00000264331 IDEP14735 1019 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 TFE3P19532 575 aaPredicted RBP6.9□□□□□ -1.31
TOP2B-201ENST00000264331 CTGFP29279 349 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 QPCTQ16769 361 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 FAM133AQ8N9E0 248 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 ZDHHC15Q96MV8 337 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 PDGFCQ9NRA1 345 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 GNL3LQ9NVN8 582 aaKnown RBP6.9□□□□□ -1.31
TOP2B-201ENST00000264331 HMGXB4Q9UGU5 601 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 CYTH4Q9UIA0 394 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 DYNC1I1O14576 645 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 MAP3K6O95382 1288 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 CST3P01034 146 aaPredicted RBP6.9□□□□□ -1.31
TOP2B-201ENST00000264331 PGFP49763 221 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 DNAJC7Q99615 494 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 LBHD1Q9BQE6 289 aaPredicted RBP6.9□□□□□ -1.31
TOP2B-201ENST00000264331 TMOD4Q9NZQ9 345 aa6.9□□□□□ -1.31
TOP2B-201ENST00000264331 CACNA1IQ9P0X4 2223 aa6.89□□□□□ -1.31
TOP2B-201ENST00000264331 PDS5AQ29RF7 1337 aaKnown RBP6.89□□□□□ -1.31
TOP2B-201ENST00000264331 GRID2IPA4D2P6 1211 aa6.89□□□□□ -1.31
TOP2B-201ENST00000264331 TULP2O00295 520 aa6.89□□□□□ -1.31
TOP2B-201ENST00000264331 TOM1O60784 492 aa6.89□□□□□ -1.31
TOP2B-201ENST00000264331 CDC25BP30305 580 aa6.89□□□□□ -1.31
TOP2B-201ENST00000264331 KCNJ1P48048 391 aa6.89□□□□□ -1.31
TOP2B-201ENST00000264331 SEC24CP53992 1094 aa6.89□□□□□ -1.31
TOP2B-201ENST00000264331 SMAD1Q15797 465 aaKnown RBP6.89□□□□□ -1.31
TOP2B-201ENST00000264331 KCTD16Q68DU8 428 aa6.89□□□□□ -1.31
TOP2B-201ENST00000264331 CERS3Q8IU89 383 aa6.89□□□□□ -1.31
TOP2B-201ENST00000264331 CEP57L1Q8IYX8 460 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms