RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 ERFP50548 548 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 MYBPC3Q14896 1274 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 USP17L1Q7RTZ2 530 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 FAM228AQ86W67 206 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 ANKRD42Q8N9B4 389 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 RETREG2Q8NC44 543 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 ABHD8Q96I13 439 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 CENPOQ9BU64 300 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 PPP1R9AQ9ULJ8 1098 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 LZTS1Q9Y250 596 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 GRIN2DO15399 1336 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 TARSL2A2RTX5 802 aaKnown RBP9.07□□□□□ -0.96
LDB3-201ENST00000263066 TRIM75PA6NK02 468 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 MMEP08473 750 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 NQO1P15559 274 aaKnown RBP9.07□□□□□ -0.96
LDB3-201ENST00000263066 SNAP25P60880 206 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 USH1GQ495M9 461 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 KCTD21Q4G0X4 260 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 ZMYM1Q5SVZ6 1142 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 SFMBT2Q5VUG0 894 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 C9orf131Q5VYM1 1079 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 SUPT20HQ8NEM7 779 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 ESR2Q92731 530 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 ATP6V0A1Q93050 837 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 DCPSQ96C86 337 aaKnown RBP9.07□□□□□ -0.96
LDB3-201ENST00000263066 PANX2Q96RD6 677 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 TANGO6Q9C0B7 1094 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 IL25Q9H293 177 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 SUCLA2Q9P2R7 463 aaPredicted RBP9.07□□□□□ -0.96
LDB3-201ENST00000263066 TFR2Q9UP52 801 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 PCDHAC2Q9Y5I4 1007 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 TRIM43BA6NCK2 446 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 SLC27A2O14975 620 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 ALDH5A1P51649 535 aaPredicted RBP9.07□□□□□ -0.96
LDB3-201ENST00000263066 RCN1Q15293 331 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 ZNF449Q6P9G9 518 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 CRELD2Q6UXH1 353 aaPredicted RBP9.07□□□□□ -0.96
LDB3-201ENST00000263066 HS2ST1Q7LGA3 356 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 TRPM8Q7Z2W7 1104 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 HEATR3Q7Z4Q2 680 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 CATIPQ7Z7H3 387 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 SREK1Q8WXA9 508 aaKnown RBP9.07□□□□□ -0.96
LDB3-201ENST00000263066 PHKBQ93100 1093 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 CAMKK2Q96RR4 588 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 KRT12Q99456 494 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 UBA5Q9GZZ9 404 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 SMARCAL1Q9NZC9 954 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 KLHL14Q9P2G3 628 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 FBXO9Q9UK97 447 aaPredicted RBP9.07□□□□□ -0.96
LDB3-201ENST00000263066 SFI1A8K8P3 1242 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 DKC1O60832 514 aaKnown RBP eCLIP9.06□□□□□ -0.96
LDB3-201ENST00000263066 FUT4P22083 530 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 NFKBIAP25963 317 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 METAP2P50579 478 aaKnown RBP eCLIP9.06□□□□□ -0.96
LDB3-201ENST00000263066 CACNA2D1P54289 1103 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 KCNJ2P63252 427 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 DLK2Q6UY11 383 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 FMR1NBQ8N0W7 255 aaPredicted RBP9.06□□□□□ -0.96
LDB3-201ENST00000263066 LRRC8CQ8TDW0 803 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 SH3RF3Q8TEJ3 882 aaPredicted RBP9.06□□□□□ -0.96
LDB3-201ENST00000263066 NMD3Q96D46 503 aaKnown RBP9.06□□□□□ -0.96
LDB3-201ENST00000263066 SPZ1Q9BXG8 430 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 TAF1DQ9H5J8 278 aaPredicted RBP9.06□□□□□ -0.96
LDB3-201ENST00000263066 FRMPD2Q68DX3 1309 aaPredicted RBP9.06□□□□□ -0.96
LDB3-201ENST00000263066 AGPSO00116 658 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 PPP2R2AP63151 447 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 RASA3Q14644 834 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 GLE1Q53GS7 698 aaKnown RBP9.06□□□□□ -0.96
LDB3-201ENST00000263066 MICALL2Q8IY33 904 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 GSDMBQ8TAX9 411 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 MDM1Q8TC05 714 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 CASP10Q92851 521 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 MCUR1Q96AQ8 359 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 PLVAPQ9BX97 442 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 RNF41Q9H4P4 317 aaPredicted RBP9.06□□□□□ -0.96
LDB3-201ENST00000263066 ZWILCHQ9H900 591 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.06□□□□□ -0.96
LDB3-201ENST00000263066 KCNH3Q9ULD8 1083 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 MYO9BQ13459 2157 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 SPECC1L-ADORA2AF8WAN1 911 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 PSMD14O00487 310 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 HSPD1P10809 573 aaKnown RBP9.06□□□□□ -0.96
LDB3-201ENST00000263066 SKOR1P84550 965 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 CYP27A1Q02318 531 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 XRCC4Q13426 336 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 ANO1Q5XXA6 986 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 PPP4R3AQ6IN85 833 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 TSEN2Q8NCE0 465 aaKnown RBP9.06□□□□□ -0.96
LDB3-201ENST00000263066 SMCR8Q8TEV9 937 aaPredicted RBP9.06□□□□□ -0.96
LDB3-201ENST00000263066 HDAC7Q8WUI4 952 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 SH3GL2Q99962 352 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 WDR35Q9P2L0 1181 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 CNOT7Q9UIV1 285 aaKnown RBP9.06□□□□□ -0.96
LDB3-201ENST00000263066 PRELID1Q9Y255 219 aa9.06□□□□□ -0.96
LDB3-201ENST00000263066 MGRN1O60291 552 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 PDE5AO76074 875 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 TNNC1P63316 161 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 MCL1Q07820 350 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 CFAP221Q4G0U5 840 aa9.05□□□□□ -0.96
LDB3-201ENST00000263066 IFNL3Q8IZI9 196 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms