RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 RAD51CO43502 376 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 KIAA0754O94854 1291 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 IBSPP21815 317 aaPredicted RBP15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 INPP5BP32019 993 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 CUL5Q93034 780 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 IQCDQ96DY2 449 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 SYT17Q9BSW7 474 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 LRRC27Q9C0I9 530 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 RIOX1Q9H6W3 641 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 RHBDL3P58872 404 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 TGFB2P61812 414 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 SEMA3FQ13275 785 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 ALS2CLQ60I27 953 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 APOBEC3HQ6NTF7 200 aaKnown RBP15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 EFCAB13Q8IY85 973 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 PCDHB13Q9Y5F0 798 aa15.86■□□□□ 0.13
SFSWAP-201ENST00000261674 A0A087WUV0 522 aaPredicted RBP15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 SSU72P8A0A1W2PR75 194 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 PTK2Q05397 1052 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 PDIA5Q14554 519 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 SLC18A3Q16572 532 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 ASTE1Q2TB18 679 aaPredicted RBP15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 SLC30A10Q6XR72 485 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 OGFOD1Q8N543 542 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 RNF10Q8N5U6 811 aaKnown RBP15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 BCAS3Q9H6U6 928 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 SEPT11Q9NVA2 429 aaKnown RBP15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 GPR75-ASB3A0A0A6YYF3 556 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 GOLGA6L10A6NI86 522 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 ZNF233A6NK53 670 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 PPP1R11O60927 126 aaPredicted RBP15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 TAL1P17542 331 aaPredicted RBP15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 PRR16Q569H4 304 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 DDX47Q9H0S4 455 aaKnown RBP15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 C10orf71Q711Q0 1435 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 PLCG2P16885 1265 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 NAB2Q15742 525 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 USH1GQ495M9 461 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 OTUD6BQ8N6M0 293 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 PLAAQ9Y263 795 aa15.85■□□□□ 0.13
SFSWAP-201ENST00000261674 CASP5P51878 434 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 PSMD2Q13200 908 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 GPR162Q16538 588 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 STRIP1Q5VSL9 837 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 GJB7Q6PEY0 223 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 SCFD1Q8WVM8 642 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 UBLCP1Q8WVY7 318 aaPredicted RBP15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 CAPN7Q9Y6W3 813 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 PNMA6FA0A0J9YX94 578 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 DDTLA6NHG4 134 aaPredicted RBP15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 PJA2O43164 708 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 ATP2C2O75185 946 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 GDF11O95390 407 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 NR1D1P20393 614 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 PSMC6P62333 389 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 ARMCX3Q9UH62 379 aaPredicted RBP15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 HDAC9Q9UKV0 1011 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 PCDHA1Q9Y5I3 950 aa15.84■□□□□ 0.13
SFSWAP-201ENST00000261674 GRID2IPA4D2P6 1211 aa15.83■□□□□ 0.13
SFSWAP-201ENST00000261674 E7EVH7 732 aa15.83■□□□□ 0.13
SFSWAP-201ENST00000261674 LCA5LO95447 670 aa15.83■□□□□ 0.13
SFSWAP-201ENST00000261674 MNAT1P51948 309 aa15.83■□□□□ 0.13
SFSWAP-201ENST00000261674 TNNC1P63316 161 aa15.83■□□□□ 0.13
SFSWAP-201ENST00000261674 GBP6Q6ZN66 633 aa15.83■□□□□ 0.13
SFSWAP-201ENST00000261674 DPH5Q9H2P9 285 aa15.83■□□□□ 0.13
SFSWAP-201ENST00000261674 TSKSQ9UJT2 592 aa15.83■□□□□ 0.13
SFSWAP-201ENST00000261674 ASPRV1Q53RT3 343 aa15.83■□□□□ 0.12
SFSWAP-201ENST00000261674 ALKBH5Q6P6C2 394 aaKnown RBP15.83■□□□□ 0.12
SFSWAP-201ENST00000261674 TRMT1LQ7Z2T5 733 aaKnown RBP15.83■□□□□ 0.12
SFSWAP-201ENST00000261674 IKZF4Q9H2S9 585 aa15.83■□□□□ 0.12
SFSWAP-201ENST00000261674 ZNRF3Q9ULT6 936 aa15.83■□□□□ 0.12
SFSWAP-201ENST00000261674 GRIN2DO15399 1336 aa15.83■□□□□ 0.12
SFSWAP-201ENST00000261674 SHOX2O60902 331 aaPredicted RBP15.83■□□□□ 0.12
SFSWAP-201ENST00000261674 ABCB4P21439 1286 aa15.83■□□□□ 0.12
SFSWAP-201ENST00000261674 C15orf52Q6ZUT6 534 aaKnown RBP15.83■□□□□ 0.12
SFSWAP-201ENST00000261674 TRIM59Q8IWR1 403 aa15.83■□□□□ 0.12
SFSWAP-201ENST00000261674 MED24O75448 989 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 TTLL1O95922 423 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 DLGAP5Q15398 846 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 EXOC3L4Q17RC7 722 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 ZNF571Q7Z3V5 609 aaPredicted RBP15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 ESYT2A0FGR8 921 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 YBX3P16989 372 aaKnown RBP eCLIP15.82■□□□□ 0.123e-8■■□□□ 11.6
SFSWAP-201ENST00000261674 CYP11B2P19099 503 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 ITIH3Q06033 890 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 ZNF543Q08ER8 600 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 TMEM119Q4V9L6 283 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 ICE2Q659A1 982 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 PEX26Q7Z412 305 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 SFR1Q86XK3 245 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 IQCKQ8N0W5 287 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 SUPT20HQ8NEM7 779 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 U2AF1L4Q8WU68 220 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 SH3GL2Q99962 352 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 TMEM39BQ9GZU3 492 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 NT5C3AQ9H0P0 336 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 NUCKS1Q9H1E3 243 aaKnown RBP15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 AMACRQ9UHK6 382 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 SERPINB13Q9UIV8 391 aa15.82■□□□□ 0.12
SFSWAP-201ENST00000261674 SNED1Q8TER0 1413 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms