RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CNGA4Q8IV77 575 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 PDILTQ8N807 584 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 PTPRN2Q92932 1015 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 CDCA5Q96FF9 252 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 DDX27Q96GQ7 796 aaKnown RBP12.89□□□□□ -0.35
CCNA1-201ENST00000255465 GPATCH3Q96I76 525 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 IFT74Q96LB3 600 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCNA1-201ENST00000255465 ZNF408Q9H9D4 720 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 CREBZFQ9NS37 354 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 ATP8A2Q9NTI2 1148 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 TBCCD1Q9NVR7 557 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 SCOCQ9UIL1 159 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 MROH7-TTC4A0A0A0MT08 1334 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 IDH1O75874 414 aaKnown RBP12.89□□□□□ -0.35
CCNA1-201ENST00000255465 TPPPO94811 219 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 LDHCP07864 332 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 CLTAP09496 248 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 ATP1A3P13637 1013 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 ALOX15P16050 662 aaPredicted RBP12.89□□□□□ -0.35
CCNA1-201ENST00000255465 USP11P51784 963 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 CACNB3P54284 484 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 MAP3K12Q12852 859 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 TTF1Q15361 905 aaPredicted RBP12.89□□□□□ -0.35
CCNA1-201ENST00000255465 CREB3L3Q68CJ9 461 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 OR52E8Q6IFG1 317 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 CDC42EP5Q6NZY7 148 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 CCDC197Q8NCU1 140 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 KCNG4Q8TDN1 519 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 EDC3Q96F86 508 aaKnown RBP12.89□□□□□ -0.35
CCNA1-201ENST00000255465 HAUS7Q99871 368 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 DEFB129Q9H1M3 183 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 TBC1D7Q9P0N9 293 aa12.89□□□□□ -0.35
CCNA1-201ENST00000255465 LARSQ9P2J5 1176 aaKnown RBP12.89□□□□□ -0.35
CCNA1-201ENST00000255465 SPDYE5A6NIY4 337 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 TMEM110-MUSTN1A8MSY1 372 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 TCP10L2B9ZVM9 353 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 FLT3P36888 993 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 CD97P48960 835 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 SLC7A5Q01650 507 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 TNFAIP1Q13829 316 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 TSHZ3Q63HK5 1081 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 TMEM110Q86TL2 294 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 EIF1ADQ8N9N8 165 aaKnown RBP12.88□□□□□ -0.35
CCNA1-201ENST00000255465 FBF1Q8TES7 1133 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 GFM2Q969S9 779 aaKnown RBP12.88□□□□□ -0.35
CCNA1-201ENST00000255465 HAPLN3Q96S86 360 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 DESI2Q9BSY9 194 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 MAK16Q9BXY0 300 aaKnown RBP12.88□□□□□ -0.35
CCNA1-201ENST00000255465 HAUS4Q9H6D7 363 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 PAG1Q9NWQ8 432 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 TMOD2Q9NZR1 351 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 DACH1Q9UI36 760 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 STK24Q9Y6E0 443 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 FOCADQ5VW36 1801 aa12.88□□□□□ -0.35
CCNA1-201ENST00000255465 ASAP2O43150 1006 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 HIP1RO75146 1068 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 YEATS4O95619 227 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 BTDP43251 543 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 ATP1A2P50993 1020 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 SEC24CP53992 1094 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 PPFIBP1Q86W92 1011 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 PIDD1Q9HB75 910 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 PANK4Q9NVE7 773 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 INTS13Q9NVM9 706 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 PPP2R3BQ9Y5P8 575 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 NEDD4P46934 1319 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 BTBD19C9JJ37 291 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 CPA3P15088 417 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 TNNI2P48788 182 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 SERPINB8P50452 374 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 LSAMPQ13449 338 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 INAQ16352 499 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 FKBP1CQ5VVH2 108 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 NCAPH2Q6IBW4 605 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 RAD9BQ6WBX8 426 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 CACTIN-AS1Q8N1I8 211 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 NECAB1Q8N987 351 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 ZIM3Q96PE6 472 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 SLF1Q9BQI6 1058 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 SYT15Q9BQS2 421 aa12.87□□□□□ -0.35
CCNA1-201ENST00000255465 EIF2AQ9BY44 585 aaKnown RBP12.87□□□□□ -0.35
CCNA1-201ENST00000255465 CNOT10Q9H9A5 744 aaKnown RBP12.87□□□□□ -0.35
CCNA1-201ENST00000255465 RPL26L1Q9UNX3 145 aaKnown RBP12.87□□□□□ -0.35
CCNA1-201ENST00000255465 ITIH6Q6UXX5 1313 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 PAPPA2Q9BXP8 1791 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 ATP9BO43861 1147 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 ORC4O43929 436 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 XBP1P17861 261 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 GNAZP19086 355 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 CYP7A1P22680 504 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 ME1P48163 572 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 VAV2P52735 878 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 TMEM62Q0P6H9 643 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 SPIDRQ14159 915 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 SPRED3Q2MJR0 410 aa12.86□□□□□ -0.35
CCNA1-201ENST00000255465 AGBL2Q5U5Z8 902 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms