RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 OR6B3Q8NGW1 331 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 SDCCAG3Q96C92 435 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 JRKLQ9Y4A0 524 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 PSMA2P25787 234 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 PHKA2P46019 1235 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 ARHGAP4P98171 946 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 ACRBPQ8NEB7 543 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 USH1CQ9Y6N9 552 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 UTYO14607 1347 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 CCNE1P24864 410 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 SOX5P35711 763 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 STRBPQ96SI9 672 aaKnown RBP9.39□□□□□ -0.91
PTCD3-201ENST00000254630 CALN1Q9BXU9 219 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 TDRD3Q9H7E2 651 aaKnown RBP9.39□□□□□ -0.91
PTCD3-201ENST00000254630 PYCARDQ9ULZ3 195 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 BCORL1Q5H9F3 1711 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 RFX7Q2KHR2 1363 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 SFI1A8K8P3 1242 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 KIF3CO14782 793 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 TTI1O43156 1089 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 DBN1Q16643 649 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 TTC19Q6DKK2 380 aaPredicted RBP9.39□□□□□ -0.91
PTCD3-201ENST00000254630 RCSD1Q6JBY9 416 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 RWDD4Q6NW29 188 aaKnown RBP9.39□□□□□ -0.91
PTCD3-201ENST00000254630 ATP6V1E2Q96A05 226 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 HINFPQ9BQA5 517 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 SAMSN1Q9NSI8 373 aaKnown RBP9.39□□□□□ -0.91
PTCD3-201ENST00000254630 FBXO40Q9UH90 709 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 NRBP1Q9UHY1 535 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 DAAM1Q9Y4D1 1078 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 ZHX2Q9Y6X8 837 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 DENND3A2RUS2 1198 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 GSTA4O15217 222 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 ADRA2BP18089 450 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 CDO1Q16878 200 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 CATSPER4Q7RTX7 472 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 EFCAB13Q8IY85 973 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 DYDC2Q96IM9 177 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 Q9H521 79 aa9.39□□□□□ -0.91
PTCD3-201ENST00000254630 SETD1BQ9UPS6 1966 aaKnown RBP9.39□□□□□ -0.91
PTCD3-201ENST00000254630 A0A1B0GUA9 196 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 TTC4O95801 387 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 CYP2E1P05181 493 aaPredicted RBP9.38□□□□□ -0.91
PTCD3-201ENST00000254630 CYP19A1P11511 503 aaPredicted RBP9.38□□□□□ -0.91
PTCD3-201ENST00000254630 EPHB4P54760 987 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 PIGOQ8TEQ8 1089 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 CHAMP1Q96JM3 812 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 BAG5Q9UL15 447 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 SCINQ9Y6U3 715 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 K7ERI5 159 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 CLGNO14967 610 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 SERPINB6P35237 376 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 TRIP13Q15645 432 aaPredicted RBP9.38□□□□□ -0.91
PTCD3-201ENST00000254630 ERICH1Q86X53 443 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 EPB41L5Q9HCM4 733 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 USP17L10C9JJH3 530 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 SART1O43290 800 aaKnown RBP9.38□□□□□ -0.91
PTCD3-201ENST00000254630 CDC25AP30304 524 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 MCUQ8NE86 351 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 DDX27Q96GQ7 796 aaKnown RBP9.38□□□□□ -0.91
PTCD3-201ENST00000254630 TMEM260Q9NX78 707 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 CDC23Q9UJX2 597 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 F8W8V4 182 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 ZNF18P17022 549 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 VSTM4Q8IW00 320 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 ARHGEF1Q92888 912 aaKnown RBP9.38□□□□□ -0.91
PTCD3-201ENST00000254630 AIFM3Q96NN9 605 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 MED4Q9NPJ6 270 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 RNF181Q9P0P0 153 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 LCMT1Q9UIC8 334 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 ABCA9Q8IUA7 1624 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 WDR19Q8NEZ3 1342 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 EPHB1P54762 984 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 PANX2Q96RD6 677 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 RMDN3Q96TC7 470 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 CD209Q9NNX6 404 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 VCX3AQ9NNX9 186 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 FIS1Q9Y3D6 152 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 PPRC1Q5VV67 1664 aaKnown RBP9.38□□□□□ -0.91
PTCD3-201ENST00000254630 CYP27B1O15528 508 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 ZNF500O60304 480 aaPredicted RBP9.38□□□□□ -0.91
PTCD3-201ENST00000254630 NMT2O60551 498 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 IL1RL1Q01638 556 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 CCDC38Q502W7 563 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 TMCO4Q5TGY1 634 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 UNC13DQ70J99 1090 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 MICAL1Q8TDZ2 1067 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 GANCQ8TET4 914 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 ABCF3Q9NUQ8 709 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 SPTLC3Q9NUV7 552 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 BAIAP2L1Q9UHR4 511 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 CAPN7Q9Y6W3 813 aa9.38□□□□□ -0.91
PTCD3-201ENST00000254630 MYO3AQ8NEV4 1616 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 SPDYE2BA6NHP3 402 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 NVLO15381 856 aaKnown RBP9.37□□□□□ -0.91
PTCD3-201ENST00000254630 SPDYE6P0CI01 402 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 SLC12A1Q13621 1099 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 NECTIN1Q15223 517 aa9.37□□□□□ -0.91
PTCD3-201ENST00000254630 DGKHQ86XP1 1220 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms