RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 KDM3AQ9Y4C1 1321 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 PPME1Q9Y570 386 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 TCHHQ07283 1943 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 WDR81Q562E7 1941 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 COL1A2P08123 1366 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 HBP1O60381 514 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 CDC25AP30304 524 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 CCT6AP40227 531 aaKnown RBP15.8■□□□□ 0.12
VPS25-201ENST00000253794 UBA7P41226 1012 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 CDK7P50613 346 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 CSPP1Q1MSJ5 1256 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 NBPF20Q3BBV1 942 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 TMEM119Q4V9L6 283 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 RESP18Q5W5W9 173 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 SHC4Q6S5L8 630 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 NECAB2Q7Z6G3 386 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 CABP7Q86V35 215 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 DIS3LQ8TF46 1054 aaKnown RBP15.8■□□□□ 0.12
VPS25-201ENST00000253794 SYMPKQ92797 1274 aaKnown RBP15.8■□□□□ 0.12
VPS25-201ENST00000253794 PAWRQ96IZ0 340 aaKnown RBP15.8■□□□□ 0.12
VPS25-201ENST00000253794 NIFKQ9BYG3 293 aaKnown RBP15.8■□□□□ 0.12
VPS25-201ENST00000253794 NT5C3AQ9H0P0 336 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 RNPEPQ9H4A4 650 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 C11orf49Q9H6J7 331 aa15.8■□□□□ 0.12
VPS25-201ENST00000253794 NRCAMQ92823 1304 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 POTEB3A0JP26 581 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 ZBTB42B2RXF5 422 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 ARVCFO00192 962 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 MYCNP04198 464 aaPredicted RBP15.79■□□□□ 0.12
VPS25-201ENST00000253794 CMA1P23946 247 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 ADAM17P78536 824 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 CYP4A11Q02928 519 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 GRB10Q13322 594 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 ITGA7Q13683 1181 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 CTTNQ14247 550 aaKnown RBP15.79■□□□□ 0.12
VPS25-201ENST00000253794 TARBP2Q15633 366 aaKnown RBP15.79■□□□□ 0.12
VPS25-201ENST00000253794 ECM1Q16610 540 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 POTEBQ6S5H4 581 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 USP49Q70CQ1 688 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 ANO5Q75V66 913 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 EPSTI1Q96J88 318 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 PNMA5Q96PV4 448 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 NACC1Q96RE7 527 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 CEP89Q96ST8 783 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 GDPD2Q9HCC8 539 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 NRBP2Q9NSY0 501 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 ANKEF1Q9NU02 776 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 GTF2IRD1Q9UHL9 959 aa15.79■□□□□ 0.12
VPS25-201ENST00000253794 DBR1Q9UK59 544 aaKnown RBP15.79■□□□□ 0.12
VPS25-201ENST00000253794 DNAH12Q6ZR08 3092 aa15.78■□□□□ 0.12
VPS25-201ENST00000253794 RRN3P2A6NIE6 340 aa15.78■□□□□ 0.12
VPS25-201ENST00000253794 SMIM10L2AP0DMW4 78 aa15.78■□□□□ 0.12
VPS25-201ENST00000253794 SMIM10L2BP0DMW5 78 aa15.78■□□□□ 0.12
VPS25-201ENST00000253794 YWHABP31946 246 aaKnown RBP15.78■□□□□ 0.12
VPS25-201ENST00000253794 TXLNAP40222 546 aa15.78■□□□□ 0.12
VPS25-201ENST00000253794 PSMC6P62333 389 aa15.78■□□□□ 0.12
VPS25-201ENST00000253794 ZNF484Q5JVG2 852 aa15.78■□□□□ 0.12
VPS25-201ENST00000253794 POTEGQ6S5H5 508 aa15.78■□□□□ 0.12
VPS25-201ENST00000253794 TPH2Q8IWU9 490 aa15.78■□□□□ 0.12
VPS25-201ENST00000253794 CALML4Q96GE6 196 aa15.78■□□□□ 0.12
VPS25-201ENST00000253794 SENP6Q9GZR1 1112 aaPredicted RBP15.78■□□□□ 0.12
VPS25-201ENST00000253794 HPSEQ9Y251 543 aa15.78■□□□□ 0.12
VPS25-201ENST00000253794 MYH9P35579 1960 aaKnown RBP15.77■□□□□ 0.12
VPS25-201ENST00000253794 MBLAC1A4D2B0 266 aaPredicted RBP15.77■□□□□ 0.12
VPS25-201ENST00000253794 INSRRP14616 1297 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 MARK3P27448 753 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 SPECC1Q5M775 1068 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 SLC39A5Q6ZMH5 540 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 OTUD6AQ7L8S5 288 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 ANKRD33Q7Z3H0 272 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 C7orf31Q8N865 590 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 TOX2Q96NM4 488 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 HDAC6Q9UBN7 1215 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 CCDC39Q9UFE4 941 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 KIAA1024Q9UPX6 916 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 TRPC6Q9Y210 931 aa15.77■□□□□ 0.12
VPS25-201ENST00000253794 MROH7Q68CQ1 1323 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 CCDC85CA6NKD9 419 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 EYA4O95677 639 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 GNAT1P11488 350 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 RARRES1P49788 294 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 PPFIA1Q13136 1202 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 KARSQ15046 597 aaKnown RBP15.76■□□□□ 0.11
VPS25-201ENST00000253794 GRIK4Q16099 956 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 E2F4Q16254 413 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 MARCH8Q5T0T0 291 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 CKAP2LQ8IYA6 745 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 LMBR1Q8WVP7 490 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 GBP4Q96PP9 640 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 CYP26B1Q9NR63 512 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 DDX19AQ9NUU7 478 aaKnown RBP15.76■□□□□ 0.11
VPS25-201ENST00000253794 STK17AQ9UEE5 414 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 DNM3Q9UQ16 869 aa15.76■□□□□ 0.11
VPS25-201ENST00000253794 MKI67P46013 3256 aaKnown RBP15.76■□□□□ 0.11
VPS25-201ENST00000253794 A0A087X0B3 334 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 IGKV6-21A0A0C4DH24 114 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 C17orf102A2RUQ5 167 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 DDX11L8A8MPP1 907 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 ZBTB39O15060 712 aa15.75■□□□□ 0.11
VPS25-201ENST00000253794 PLCG1P19174 1290 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms