RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 SYCP2LQ5T4T6 812 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 DIEXFQ68CQ4 756 aaKnown RBP4.31□□□□□ -1.72
RBM39-201ENST00000253363 G2E3Q7L622 706 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 RNF180Q86T96 592 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 DDX42Q86XP3 938 aaKnown RBP eCLIP4.31□□□□□ -1.722e-6■□□□□ 9.8
RBM39-201ENST00000253363 TAB3Q8N5C8 712 aaPredicted RBP4.31□□□□□ -1.72
RBM39-201ENST00000253363 ANKRD44Q8N8A2 993 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 FAM13CQ8NE31 585 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 UBASH3BQ8TF42 649 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 MFSD3Q96ES6 412 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 HAUS7Q99871 368 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 TARS2Q9BW92 718 aaKnown RBP4.31□□□□□ -1.72
RBM39-201ENST00000253363 LRRC27Q9C0I9 530 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 RSPH9Q9H1X1 276 aaPredicted RBP4.31□□□□□ -1.72
RBM39-201ENST00000253363 KRT82Q9NSB4 513 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 GGA3Q9NZ52 723 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 SUSD2Q9UGT4 822 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 PLAAQ9Y263 795 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 SCINQ9Y6U3 715 aa4.31□□□□□ -1.72
RBM39-201ENST00000253363 MYH13Q9UKX3 1938 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 LILRB5O75023 590 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 AOC2O75106 756 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 DEAF1O75398 565 aaPredicted RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 CELF2O95319 508 aaKnown RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 SDSP20132 328 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 CCNFP41002 786 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 PDE4BQ07343 736 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 NCAPHQ15003 741 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 TTLL5Q6EMB2 1281 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 STRA8Q7Z7C7 330 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 WDR75Q8IWA0 830 aaKnown RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 MSL3Q8N5Y2 521 aaKnown RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 VGLL2Q8N8G2 317 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 NANOS1Q8WY41 292 aaKnown RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 TEKT1Q969V4 418 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 CDCA5Q96FF9 252 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 SLC39A13Q96H72 371 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 SUCLG2Q96I99 432 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 ARPC5LQ9BPX5 153 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 DBNDD1Q9H9R9 158 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 MRPS23Q9Y3D9 190 aaKnown RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 TACC3Q9Y6A5 838 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 WISP1O95388 367 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 APPP05067 770 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 EPXP11678 715 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 DRD2P14416 443 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 FGFR2P21802 821 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 NT5C2P49902 561 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 BRDTQ58F21 947 aaPredicted RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 PCGF5Q86SE9 256 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 SAPCD2Q86UD0 394 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 MCATQ8IVS2 390 aaKnown RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 DMRTC2Q8IXT2 367 aaPredicted RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 SLFN12Q8IYM2 578 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 LRRC47Q8N1G4 583 aaKnown RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 OTUD6BQ8N6M0 293 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 ADCY4Q8NFM4 1077 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.3□□□□□ -1.72
RBM39-201ENST00000253363 KISS1RQ969F8 398 aaPredicted RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 KIFC2Q96AC6 838 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 ZDHHC15Q96MV8 337 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 NOL10Q9BSC4 688 aaKnown RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 BICC1Q9H694 974 aaKnown RBP4.3□□□□□ -1.72
RBM39-201ENST00000253363 PICK1Q9NRD5 415 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 HOMER2Q9NSB8 354 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 SLC12A7Q9Y666 1083 aa4.3□□□□□ -1.72
RBM39-201ENST00000253363 DYTNA2CJ06 578 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 ENTPD3O75355 529 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 ITGAVP06756 1048 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 NFKB2Q00653 900 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 HDAC1Q13547 482 aaPredicted RBP4.29□□□□□ -1.72
RBM39-201ENST00000253363 ZNF460Q14592 562 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 SF1Q15637 639 aaKnown RBP4.29□□□□□ -1.72
RBM39-201ENST00000253363 ATP2B3Q16720 1220 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 CT47A1Q5JQC4 288 aaPredicted RBP4.29□□□□□ -1.72
RBM39-201ENST00000253363 NOL9Q5SY16 702 aaKnown RBP4.29□□□□□ -1.72
RBM39-201ENST00000253363 ZBTB37Q5TC79 503 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 SCARA3Q6AZY7 606 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 FAM117BQ6P1L5 589 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 SLC4A10Q6U841 1118 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 LHFPL2Q6ZUX7 228 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 WFDC8Q8IUA0 241 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 BAHD1Q8TBE0 780 aaPredicted RBP4.29□□□□□ -1.72
RBM39-201ENST00000253363 NAP1L4Q99733 375 aaKnown RBP4.29□□□□□ -1.72
RBM39-201ENST00000253363 CDC6Q99741 560 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 WNT10AQ9GZT5 417 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 SLC45A1Q9Y2W3 748 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 RFX7Q2KHR2 1363 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 DOCK2Q92608 1830 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 HSPA8P11142 646 aaKnown RBP4.29□□□□□ -1.72
RBM39-201ENST00000253363 ALAS2P22557 587 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 RFX5P48382 616 aaPredicted RBP4.29□□□□□ -1.72
RBM39-201ENST00000253363 ARL4DP49703 201 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 HUNKP57058 714 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 CNNM4Q6P4Q7 775 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 LRRTM3Q86VH5 581 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 RASAL3Q86YV0 1011 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 LRRN4CLQ8ND94 238 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 TTC9Q92623 222 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 TMEM87BQ96K49 555 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms