RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 FAM167AQ96KS9 214 aa27.46■■□□□ 1.99
SDF2L1-201ENST00000248958 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.46■■□□□ 1.99
SDF2L1-201ENST00000248958 IGSF9BQ9UPX0 1349 aa27.45■■□□□ 1.99
SDF2L1-201ENST00000248958 FAM205CA6NFA0 338 aa27.45■■□□□ 1.98
SDF2L1-201ENST00000248958 CXCL10P02778 98 aa27.45■■□□□ 1.98
SDF2L1-201ENST00000248958 IGBP1P78318 339 aa27.45■■□□□ 1.98
SDF2L1-201ENST00000248958 GNL2Q13823 731 aaKnown RBP27.45■■□□□ 1.98
SDF2L1-201ENST00000248958 MARCH8Q5T0T0 291 aa27.45■■□□□ 1.98
SDF2L1-201ENST00000248958 TRAF7Q6Q0C0 670 aa27.45■■□□□ 1.98
SDF2L1-201ENST00000248958 OTOP2Q7RTS6 562 aa27.45■■□□□ 1.98
SDF2L1-201ENST00000248958 SLFN12Q8IYM2 578 aa27.45■■□□□ 1.98
SDF2L1-201ENST00000248958 CEP131Q9UPN4 1083 aa27.45■■□□□ 1.98
SDF2L1-201ENST00000248958 CHMP2AO43633 222 aa27.44■■□□□ 1.98
SDF2L1-201ENST00000248958 PPP2R5CQ13362 524 aa27.44■■□□□ 1.98
SDF2L1-201ENST00000248958 FAM26DQ5JW98 314 aa27.44■■□□□ 1.98
SDF2L1-201ENST00000248958 GJA10Q969M2 543 aa27.44■■□□□ 1.98
SDF2L1-201ENST00000248958 PCDHA2Q9Y5H9 948 aa27.44■■□□□ 1.98
SDF2L1-201ENST00000248958 BAIAP3O94812 1187 aa27.43■■□□□ 1.98
SDF2L1-201ENST00000248958 ATP4AP20648 1035 aa27.43■■□□□ 1.98
SDF2L1-201ENST00000248958 NRBP2Q9NSY0 501 aa27.43■■□□□ 1.98
SDF2L1-201ENST00000248958 NBNO60934 754 aa27.42■■□□□ 1.98
SDF2L1-201ENST00000248958 ORC2Q13416 577 aaPredicted RBP27.42■■□□□ 1.98
SDF2L1-201ENST00000248958 GPNMBQ14956 572 aa27.42■■□□□ 1.98
SDF2L1-201ENST00000248958 CNKSR3Q6P9H4 555 aa27.42■■□□□ 1.98
SDF2L1-201ENST00000248958 MTHFD1LQ6UB35 978 aa27.42■■□□□ 1.98
SDF2L1-201ENST00000248958 POTEDQ86YR6 584 aa27.42■■□□□ 1.98
SDF2L1-201ENST00000248958 HAS1Q92839 578 aa27.42■■□□□ 1.98
SDF2L1-201ENST00000248958 SMC3Q9UQE7 1217 aa27.42■■□□□ 1.98
SDF2L1-201ENST00000248958 DKC1O60832 514 aaKnown RBP eCLIP27.41■■□□□ 1.98
SDF2L1-201ENST00000248958 RUFY4Q6ZNE9 571 aa27.41■■□□□ 1.98
SDF2L1-201ENST00000248958 NME8Q8N427 588 aa27.41■■□□□ 1.98
SDF2L1-201ENST00000248958 VAV3Q9UKW4 847 aa27.41■■□□□ 1.98
SDF2L1-201ENST00000248958 SLC4A7Q9Y6M7 1214 aa27.41■■□□□ 1.98
SDF2L1-201ENST00000248958 TET1Q8NFU7 2136 aa27.41■■□□□ 1.98
SDF2L1-201ENST00000248958 SMIM35A0A1B0GVV1 85 aa27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 ZBBXA8MT70 800 aa27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 NEMFO60524 1076 aa27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 EFCAB14O75071 495 aa27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 GJB2P29033 226 aa27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 TRAPPC10P48553 1259 aa27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 CALCRLQ16602 461 aa27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 FAM109BQ6ICB4 259 aaPredicted RBP27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 NOSTRINQ8IVI9 506 aa27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 DNAJB3Q8WWF6 145 aa27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 CXXC1Q9P0U4 656 aaPredicted RBP27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 NOL7Q9UMY1 257 aaKnown RBP27.4■■□□□ 1.98
SDF2L1-201ENST00000248958 OATP04181 439 aa27.39■■□□□ 1.98
SDF2L1-201ENST00000248958 U2AF2P26368 475 aaKnown RBP eCLIP27.39■■□□□ 1.98
SDF2L1-201ENST00000248958 KLRC1P26715 233 aa27.39■■□□□ 1.98
SDF2L1-201ENST00000248958 MBTPS1Q14703 1052 aa27.39■■□□□ 1.98
SDF2L1-201ENST00000248958 IER5Q5VY09 327 aa27.39■■□□□ 1.98
SDF2L1-201ENST00000248958 TRAPPC12Q8WVT3 735 aa27.39■■□□□ 1.98
SDF2L1-201ENST00000248958 M0QZ92 97 aa27.38■■□□□ 1.97
SDF2L1-201ENST00000248958 MAGEB2O15479 319 aa27.38■■□□□ 1.97
SDF2L1-201ENST00000248958 CTSHP09668 335 aa27.38■■□□□ 1.97
SDF2L1-201ENST00000248958 PSMC5P62195 406 aa27.38■■□□□ 1.97
SDF2L1-201ENST00000248958 PRKCEQ02156 737 aa27.38■■□□□ 1.97
SDF2L1-201ENST00000248958 CUL4AQ13619 759 aa27.38■■□□□ 1.97
SDF2L1-201ENST00000248958 PHOSPHO2Q8TCD6 241 aa27.38■■□□□ 1.97
SDF2L1-201ENST00000248958 SLC9A7Q96T83 725 aa27.38■■□□□ 1.97
SDF2L1-201ENST00000248958 PCDHA12Q9UN75 941 aa27.38■■□□□ 1.97
SDF2L1-201ENST00000248958 ABHD14A-ACY1A0A1B0GW23 586 aa27.37■■□□□ 1.97
SDF2L1-201ENST00000248958 ZNF862O60290 1169 aa27.37■■□□□ 1.97
SDF2L1-201ENST00000248958 MGAT3Q09327 533 aa27.37■■□□□ 1.97
SDF2L1-201ENST00000248958 IKBKEQ14164 716 aa27.37■■□□□ 1.97
SDF2L1-201ENST00000248958 EPHA7Q15375 998 aa27.37■■□□□ 1.97
SDF2L1-201ENST00000248958 PLEKHG4Q58EX7 1191 aa27.37■■□□□ 1.97
SDF2L1-201ENST00000248958 EVPLQ92817 2033 aa27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 TMEM265A0A087WTH1 108 aa27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 ZBTB42B2RXF5 422 aa27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 CHRNA1P02708 482 aa27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 P4HBP07237 508 aaKnown RBP27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 MRPS6P82932 125 aaKnown RBP27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 RAB30Q15771 203 aa27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 UGCGQ16739 394 aa27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 XKR3Q5GH77 459 aa27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 SEPT8Q92599 483 aa27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 APBB2Q92870 758 aa27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 FAM49AQ9H0Q0 323 aaPredicted RBP27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 SQORQ9Y6N5 450 aa27.36■■□□□ 1.97
SDF2L1-201ENST00000248958 LAMA3Q16787 3333 aa27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 SIP14410 1827 aa27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 H3BQV1 296 aa27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 EML1O00423 815 aa27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 ATP2B1P20020 1258 aa27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 MCM7P33993 719 aa27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 QARSP47897 775 aaKnown RBP27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 KCNJ6P48051 423 aa27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 ZNF697Q5TEC3 545 aa27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 TRMT1LQ7Z2T5 733 aaKnown RBP27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 MTMR9Q96QG7 549 aa27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 NIFKQ9BYG3 293 aaKnown RBP27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 TTC12Q9H892 705 aaPredicted RBP27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 TRPV2Q9Y5S1 764 aa27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 CDY2AQ9Y6F7 541 aa27.35■■□□□ 1.97
SDF2L1-201ENST00000248958 KIF28PB7ZC32 967 aa27.34■■□□□ 1.97
SDF2L1-201ENST00000248958 C22orf31O95567 290 aa27.34■■□□□ 1.97
SDF2L1-201ENST00000248958 ATP2A2P16615 1042 aaKnown RBP27.34■■□□□ 1.97
SDF2L1-201ENST00000248958 SPIRE1Q08AE8 756 aa27.34■■□□□ 1.97
SDF2L1-201ENST00000248958 TTC38Q5R3I4 469 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms