RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ANKRD40Q6AI12 368 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 MIS18BP1Q6P0N0 1132 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 ABHD15Q6UXT9 468 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 EPM2AIP1Q7L775 607 aaPredicted RBP15.73■□□□□ 0.11
SDF2-201ENST00000247020 OTUD6AQ7L8S5 288 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 CCDC186Q7Z3E2 898 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 ZNF467Q7Z7K2 595 aaPredicted RBP15.73■□□□□ 0.11
SDF2-201ENST00000247020 PORCNQ9H237 461 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 SEMA6BQ9H3T3 888 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 PARVGQ9HBI0 331 aa15.73■□□□□ 0.11
SDF2-201ENST00000247020 MAGEC2Q9UBF1 373 aaPredicted RBP15.73■□□□□ 0.11
SDF2-201ENST00000247020 MAPTP10636 758 aaKnown RBP15.72■□□□□ 0.11
SDF2-201ENST00000247020 ACTR2P61160 394 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 ZCWPW2Q504Y3 356 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 RGMBQ6NW40 437 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 STXBP4Q6ZWJ1 553 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 TMC6Q7Z403 805 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 SAPCD2Q86UD0 394 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 SFR1Q86XK3 245 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 ANKRD13CQ8N6S4 541 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 CCDC150Q8NCX0 1101 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 ZNF526Q8TF50 670 aaPredicted RBP15.72■□□□□ 0.11
SDF2-201ENST00000247020 HPS3Q969F9 1004 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 CCDC43Q96MW1 224 aaKnown RBP15.72■□□□□ 0.11
SDF2-201ENST00000247020 PTPN18Q99952 460 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 SRRTQ9BXP5 876 aaKnown RBP15.72■□□□□ 0.11
SDF2-201ENST00000247020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.72■□□□□ 0.11
SDF2-201ENST00000247020 IVNS1ABPQ9Y6Y0 642 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 MCM3APO60318 1980 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 IGSF9BQ9UPX0 1349 aa15.72■□□□□ 0.11
SDF2-201ENST00000247020 SUPT20HL2P0C7V6 817 aa15.71■□□□□ 0.11
SDF2-201ENST00000247020 MAPK4P31152 587 aa15.71■□□□□ 0.11
SDF2-201ENST00000247020 ZNF157P51786 506 aaPredicted RBP15.71■□□□□ 0.11
SDF2-201ENST00000247020 MKRN3Q13064 507 aaKnown RBP15.71■□□□□ 0.11
SDF2-201ENST00000247020 KRT31Q15323 416 aa15.71■□□□□ 0.11
SDF2-201ENST00000247020 EDRF1Q3B7T1 1238 aa15.71■□□□□ 0.11
SDF2-201ENST00000247020 PADI6Q6TGC4 694 aa15.71■□□□□ 0.11
SDF2-201ENST00000247020 SEPT14Q6ZU15 432 aa15.71■□□□□ 0.11
SDF2-201ENST00000247020 IRF2BP1Q8IU81 584 aa15.71■□□□□ 0.11
SDF2-201ENST00000247020 SLC17A8Q8NDX2 589 aa15.71■□□□□ 0.11
SDF2-201ENST00000247020 EFCC1Q9HA90 598 aa15.71■□□□□ 0.11
SDF2-201ENST00000247020 RTN4Q9NQC3 1192 aaKnown RBP15.71■□□□□ 0.11
SDF2-201ENST00000247020 INTS13Q9NVM9 706 aa15.71■□□□□ 0.11
SDF2-201ENST00000247020 DIS3Q9Y2L1 958 aaKnown RBP15.71■□□□□ 0.11
SDF2-201ENST00000247020 TPM2P07951 284 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 SLC10A3P09131 477 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 UBA1P22314 1058 aaKnown RBP15.7■□□□□ 0.1
SDF2-201ENST00000247020 COPB1P53618 953 aaKnown RBP15.7■□□□□ 0.1
SDF2-201ENST00000247020 FKBP3Q00688 224 aaKnown RBP15.7■□□□□ 0.1
SDF2-201ENST00000247020 SP2Q02086 613 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 CACNB1Q02641 598 aaPredicted RBP15.7■□□□□ 0.1
SDF2-201ENST00000247020 RAD51AP2Q09MP3 1159 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 ALCAMQ13740 583 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 UGCGQ16739 394 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 ZNF792Q3KQV3 632 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 CCDC144BQ3MJ40 725 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 HSP90AA4PQ58FG1 418 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 WDR78Q5VTH9 848 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 ZC3H3Q8IXZ2 948 aaKnown RBP15.7■□□□□ 0.1
SDF2-201ENST00000247020 ZNF507Q8TCN5 953 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 SCFD1Q8WVM8 642 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 HHIPL1Q96JK4 782 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 CEP63Q96MT8 703 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 KCTD10Q9H3F6 313 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 R3HDMLQ9H3Y0 253 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 ZHX3Q9H4I2 956 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 TLL2Q9Y6L7 1015 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 ITIH6Q6UXX5 1313 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 ADGRA2Q96PE1 1338 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 IGKV6D-21A0A0A0MT36 114 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 PDXKO00764 312 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 ZBTB39O15060 712 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 FARP2O94887 1054 aaPredicted RBP15.7■□□□□ 0.1
SDF2-201ENST00000247020 GNA14O95837 355 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 PGK2P07205 417 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 PTGS1P23219 599 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 FSTL1Q12841 308 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 SPECC1LQ69YQ0 1117 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 METTL7BQ6UX53 244 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 CYFIP1Q7L576 1253 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 DRC1Q96MC2 740 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 MRPL44Q9H9J2 332 aaKnown RBP15.7■□□□□ 0.1
SDF2-201ENST00000247020 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.7■□□□□ 0.1
SDF2-201ENST00000247020 LARSQ9P2J5 1176 aaKnown RBP15.7■□□□□ 0.1
SDF2-201ENST00000247020 GABBR1Q9UBS5 961 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 NRBP1Q9UHY1 535 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 TRAF3IP3Q9Y228 551 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 PPME1Q9Y570 386 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 MAFBQ9Y5Q3 323 aaPredicted RBP15.7■□□□□ 0.1
SDF2-201ENST00000247020 SYNGAP1Q96PV0 1343 aa15.7■□□□□ 0.1
SDF2-201ENST00000247020 RSPH10B2B2RC85 870 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 NRDCO43847 1150 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 RSPH10BP0C881 870 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 ADORA2AP29274 412 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 PBX1P40424 430 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 GRB14Q14449 540 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 LRRC41Q15345 812 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 NFIL3Q16649 462 aa15.69■□□□□ 0.1
SDF2-201ENST00000247020 KNOP1Q1ED39 458 aaKnown RBP15.69■□□□□ 0.1
SDF2-201ENST00000247020 XKR3Q5GH77 459 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms