RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 NLRX1Q86UT6 975 aa14.9□□□□□ -0.02
NCLN-201ENST00000246117 PASD1Q8IV76 773 aa14.9□□□□□ -0.02
NCLN-201ENST00000246117 REEP2Q9BRK0 252 aa14.9□□□□□ -0.02
NCLN-201ENST00000246117 TEKT3Q9BXF9 490 aa14.9□□□□□ -0.02
NCLN-201ENST00000246117 L1RE1Q9UN81 338 aa14.9□□□□□ -0.02
NCLN-201ENST00000246117 PVALEFA0A1B0GWK0 134 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 CASP4P49662 377 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 DRAP1Q14919 205 aaPredicted RBP14.89□□□□□ -0.03
NCLN-201ENST00000246117 CCDC93Q567U6 631 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 HAUS1Q96CS2 278 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 FAM118BQ9BPY3 351 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 KCNQ5Q9NR82 932 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 IKBKGQ9Y6K9 419 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 TRAF1Q13077 416 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 ARHGEF16Q5VV41 709 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 CEP72Q9P209 647 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 PCDHAC2Q9Y5I4 1007 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 KRT15P19012 456 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 PSMC6P62333 389 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 KNOP1Q1ED39 458 aaKnown RBP14.89□□□□□ -0.03
NCLN-201ENST00000246117 SHROOM1Q2M3G4 852 aaPredicted RBP14.89□□□□□ -0.03
NCLN-201ENST00000246117 CCNI2Q6ZMN8 369 aaPredicted RBP14.89□□□□□ -0.03
NCLN-201ENST00000246117 USP37Q86T82 979 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 DUSP9Q99956 384 aaKnown RBP14.89□□□□□ -0.03
NCLN-201ENST00000246117 TRIM51Q9BSJ1 452 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 FBXO28Q9NVF7 368 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 AGTPBP1Q9UPW5 1226 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.89□□□□□ -0.03
NCLN-201ENST00000246117 COL5A2P05997 1499 aaPredicted RBP14.89□□□□□ -0.03
NCLN-201ENST00000246117 PALM3A6NDB9 673 aaPredicted RBP14.89□□□□□ -0.03
NCLN-201ENST00000246117 PDE6BP35913 854 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 C2CD6Q53TS8 623 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 CDC42EP5Q6NZY7 148 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 NAP1L3Q99457 506 aaPredicted RBP14.89□□□□□ -0.03
NCLN-201ENST00000246117 KBTBD4Q9NVX7 518 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 FAM169AQ9Y6X4 670 aa14.89□□□□□ -0.03
NCLN-201ENST00000246117 ARHGAP23Q9P227 1491 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 PDS5AQ29RF7 1337 aaKnown RBP14.88□□□□□ -0.03
NCLN-201ENST00000246117 PDE2AO00408 941 aaPredicted RBP14.88□□□□□ -0.03
NCLN-201ENST00000246117 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
NCLN-201ENST00000246117 EPC2Q52LR7 807 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 COA1Q9GZY4 146 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 SH2D4AQ9H788 454 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 SWAP70Q9UH65 585 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 SLC16A4O15374 487 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 PPFIA4O75335 1185 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 PTK2Q05397 1052 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 NAALADL2Q58DX5 795 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 RSRC2Q7L4I2 434 aaKnown RBP14.88□□□□□ -0.03
NCLN-201ENST00000246117 NLGN1Q8N2Q7 840 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 ARL8AQ96BM9 186 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 MTMR8Q96EF0 704 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 C7orf25Q9BPX7 421 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 CCDC77Q9BR77 488 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 PAGR1Q9BTK6 254 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 POC1B-GALNT4F8VUJ3 575 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 ZBTB39O15060 712 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 NDUFB10O96000 172 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 CC2D2BQ6DHV5 1058 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 TMEM139Q8IV31 216 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 TCP11Q8WWU5 503 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 VPS37BQ9H9H4 285 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 HPCAL4Q9UM19 191 aa14.88□□□□□ -0.03
NCLN-201ENST00000246117 CAMTA1Q9Y6Y1 1673 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 DYNLT1P63172 113 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 C16orf86Q6ZW13 317 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 CACNA2D3Q8IZS8 1091 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 PAF1Q8N7H5 531 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 GDAP1Q8TB36 358 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 IFT74Q96LB3 600 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 EIF2AK1Q9BQI3 630 aaKnown RBP14.87□□□□□ -0.03
NCLN-201ENST00000246117 ZNF341Q9BYN7 854 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 RAB17Q9H0T7 212 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.87□□□□□ -0.03
NCLN-201ENST00000246117 TTI1O43156 1089 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 CD58P19256 250 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 MXI1P50539 228 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 LRRC14Q15048 493 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 FAM133BQ5BKY9 247 aaKnown RBP14.87□□□□□ -0.03
NCLN-201ENST00000246117 PRAMEF18Q5VWM3 479 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 IKZF4Q9H2S9 585 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 NKIRAS1Q9NYS0 192 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 MRPL11Q9Y3B7 192 aaKnown RBP14.87□□□□□ -0.03
NCLN-201ENST00000246117 UBR1Q8IWV7 1749 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 SART1O43290 800 aaKnown RBP14.87□□□□□ -0.03
NCLN-201ENST00000246117 FOSP01100 380 aaPredicted RBP14.87□□□□□ -0.03
NCLN-201ENST00000246117 RPSAP08865 295 aaKnown RBP14.87□□□□□ -0.03
NCLN-201ENST00000246117 MAGOHP61326 146 aaKnown RBP14.87□□□□□ -0.03
NCLN-201ENST00000246117 ZFPM1Q8IX07 1006 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 FBF1Q8TES7 1133 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 KIFAP3Q92845 792 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 RAVER2Q9HCJ3 691 aaKnown RBP14.87□□□□□ -0.03
NCLN-201ENST00000246117 LCMT1Q9UIC8 334 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 ITIH6Q6UXX5 1313 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 NRXN3Q9Y4C0 1643 aa14.87□□□□□ -0.03
NCLN-201ENST00000246117 ANO9A1A5B4 782 aa14.86□□□□□ -0.03
NCLN-201ENST00000246117 UCHL3P15374 230 aa14.86□□□□□ -0.03
NCLN-201ENST00000246117 FERP16591 822 aa14.86□□□□□ -0.03
NCLN-201ENST00000246117 ARHGAP25P42331 645 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms