RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 C10orf76Q5T2E6 689 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 RPAP1Q9BWH6 1393 aaPredicted RBP20.34■□□□□ 0.85
MBD3-201ENST00000156825 TMCO4Q5TGY1 634 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 MCF2LO15068 1137 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 ZWINTO95229 277 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 AP3B2Q13367 1082 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 RCSD1Q6JBY9 416 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 OR6B3Q8NGW1 331 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 CDKL2Q92772 493 aa20.34■□□□□ 0.85
MBD3-201ENST00000156825 BBOF1Q8ND07 529 aa20.33■□□□□ 0.85
MBD3-201ENST00000156825 LRFN2Q9ULH4 789 aa20.33■□□□□ 0.85
MBD3-201ENST00000156825 TEX33O43247 280 aa20.33■□□□□ 0.85
MBD3-201ENST00000156825 BNIP3LO60238 219 aa20.33■□□□□ 0.85
MBD3-201ENST00000156825 TSNAXIP1Q2TAA8 658 aa20.33■□□□□ 0.85
MBD3-201ENST00000156825 BBS9Q3SYG4 887 aa20.33■□□□□ 0.85
MBD3-201ENST00000156825 MRPL47Q9HD33 250 aaKnown RBP20.33■□□□□ 0.85
MBD3-201ENST00000156825 PHLPP2Q6ZVD8 1323 aa20.33■□□□□ 0.85
MBD3-201ENST00000156825 RBBP5Q15291 538 aaKnown RBP20.33■□□□□ 0.84
MBD3-201ENST00000156825 TRIM11Q96F44 468 aa20.33■□□□□ 0.84
MBD3-201ENST00000156825 PANX2Q96RD6 677 aa20.33■□□□□ 0.84
MBD3-201ENST00000156825 FAM114A2Q9NRY5 505 aa20.33■□□□□ 0.84
MBD3-201ENST00000156825 NR3C1P04150 777 aa20.33■□□□□ 0.84
MBD3-201ENST00000156825 EPHB4P54760 987 aa20.33■□□□□ 0.84
MBD3-201ENST00000156825 IFT88Q13099 833 aa20.33■□□□□ 0.84
MBD3-201ENST00000156825 HPS3Q969F9 1004 aa20.33■□□□□ 0.84
MBD3-201ENST00000156825 FAM213AQ9BRX8 229 aa20.33■□□□□ 0.84
MBD3-201ENST00000156825 HEMGNQ9BXL5 484 aa20.33■□□□□ 0.84
MBD3-201ENST00000156825 SHROOM2Q13796 1616 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 WDR91A4D1P6 747 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 RCN2Q14257 317 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 HDAC11Q96DB2 347 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 FGGP02679 453 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 ARL4AP40617 200 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 PLCB4Q15147 1175 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 PPP6R3Q5H9R7 873 aaPredicted RBP20.32■□□□□ 0.84
MBD3-201ENST00000156825 ZNF746Q6NUN9 644 aaPredicted RBP20.32■□□□□ 0.84
MBD3-201ENST00000156825 METTL23Q86XA0 190 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 EXOC8Q8IYI6 725 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 MXD3Q9BW11 206 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 FIS1Q9Y3D6 152 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 LRRC53A6NM62 1247 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 MYO1EQ12965 1108 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 RNF10Q8N5U6 811 aaKnown RBP20.32■□□□□ 0.84
MBD3-201ENST00000156825 CFAP61Q8NHU2 1237 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 CLDN3O15551 220 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 COASYQ13057 564 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 SLC27A3Q5K4L6 730 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 SIX6OS1Q8N1H7 587 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 OTUD5Q96G74 571 aa20.32■□□□□ 0.84
MBD3-201ENST00000156825 A0A1B0GUA9 196 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 PRPSAP2O60256 369 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 RASSF2P50749 326 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 PRELPP51888 382 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 GRM4Q14833 912 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 TRIM68Q6AZZ1 485 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 SWSAP1Q6NVH7 229 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 SHC4Q6S5L8 630 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 SRBD1Q8N5C6 995 aaKnown RBP20.31■□□□□ 0.84
MBD3-201ENST00000156825 HSPH1Q92598 858 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 KCNH2Q12809 1159 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 CCDC144BQ3MJ40 725 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 BARHL2Q9NY43 387 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 INPP5FQ9Y2H2 1132 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 CPP00450 1065 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 CLCN6P51797 869 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 GFPT1Q06210 699 aaPredicted RBP20.31■□□□□ 0.84
MBD3-201ENST00000156825 STXBP2Q15833 593 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 RAD54LQ92698 747 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 RUNDC3BQ96NL0 473 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 NFU1Q9UMS0 254 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 FCER1AP12319 257 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 IRX4P78413 519 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 LMNB2Q03252 620 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 RC3H1Q5TC82 1133 aaKnown RBP20.31■□□□□ 0.84
MBD3-201ENST00000156825 CYFIP1Q7L576 1253 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 ERICH1Q86X53 443 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 SAAL1Q96ER3 474 aa20.31■□□□□ 0.84
MBD3-201ENST00000156825 ALKQ9UM73 1620 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 TET3O43151 1660 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 PALMO75781 387 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 CFAP57Q96MR6 1250 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 TNS3Q68CZ2 1445 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 STK36Q9NRP7 1315 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 ACSL3O95573 720 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 CCDC38Q502W7 563 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 GJD4Q96KN9 370 aaPredicted RBP20.3■□□□□ 0.84
MBD3-201ENST00000156825 ABCB6Q9NP58 842 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 GABBR1Q9UBS5 961 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 ARHGAP31Q2M1Z3 1444 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 G3BP2Q9UN86 482 aaKnown RBP20.3■□□□□ 0.84
MBD3-201ENST00000156825 DENND3A2RUS2 1198 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 CTNND1O60716 968 aaKnown RBP20.3■□□□□ 0.84
MBD3-201ENST00000156825 MYL3P08590 195 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 DSTYKQ6XUX3 929 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 ARHGEF18Q6ZSZ5 1173 aa20.3■□□□□ 0.84
MBD3-201ENST00000156825 LGALS16A8MUM7 142 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 WDR64B1ANS9 1081 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 GYS2P54840 703 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 NSUN4Q96CB9 384 aaKnown RBP20.29■□□□□ 0.84
MBD3-201ENST00000156825 ABHD10Q9NUJ1 306 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms