RNA–Protein interactions for RNA: ENSMUST00000165964.7

Lig1-210, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-210ENSMUST00000165964 Rapgef1Q3UHC1 1224 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Mettl14Q3UIK4 456 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Meis1Q60954 390 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Epha7Q61772 998 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Six2Q62232 296 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Celf4Q7TSY6 486 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Rfc4Q99J62 364 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 RtcbQ99LF4 505 aaKnown RBP13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Psma8Q9CWH6 250 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Rasgef1cQ9D300 466 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 PigoQ9JJI6 1093 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Vav3Q9R0C8 847 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Pacsin2Q9WVE8 486 aaKnown RBP13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Zfp174B9EJW5 407 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Nova2D3YVV7 556 aaKnown RBP13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 H2afzP0C0S6 128 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Fbln1Q08879 705 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Cul4aQ3TCH7 759 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 H2afvQ3THW5 128 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Pls1Q3V0K9 630 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Pank4Q80YV4 820 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Cnot10Q8BH15 744 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Lrrc4cQ8C031 640 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Kiaa1024Q8K3V7 917 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Dr1Q91WV0 176 aa13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Orc1Q9Z1N2 840 aaKnown RBP13.32□□□□□ -0.28
Lig1-210ENSMUST00000165964 Zfp984A2A7A2 547 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Chd5A2A8L1 1946 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Phrf1A6H619 1682 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Qtrt2B8ZXI1 415 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Scgb2b7D3YYY1 112 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Bend4P86174 541 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Nlrp4cQ3TKR3 982 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Ehbp1Q69ZW3 1231 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Pitpnm2Q6ZPQ6 1335 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Rps6ka6Q7TPS0 764 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Pja2Q80U04 707 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Mxd3Q80US8 206 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Trmt2aQ8BNV1 574 aaKnown RBP13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Scyl2Q8CFE4 930 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Lrrc45Q8CIM1 670 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Rpap2Q8VC34 614 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Txnrd3Q99MD6 652 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Rabl3Q9D4V7 236 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Zfp831A2ADM8 1628 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Copb2O55029 905 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 HelqQ2VPA6 1069 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Trip13Q3UA06 432 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Cracr2aQ3UP38 310 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Nr2e1Q64104 385 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Fam228aQ8CDW1 299 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Ergic2Q9CR89 377 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 NagaQ9QWR8 415 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Ankrd2Q9WV06 328 aa13.31□□□□□ -0.28
Lig1-210ENSMUST00000165964 Mroh8E9PYI4 1049 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Pcdha4O88689 947 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Tom1O88746 492 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Lig3P97386 1015 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Cyp2e1Q05421 493 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Znf697Q569E7 569 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Tspyl5Q69ZB3 406 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Ppp2r2aQ6P1F6 447 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Ccdc28aQ8CEI3 192 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 PdxkQ8K183 312 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Slc35f6Q8VE96 372 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Cbwd1Q8VEH6 393 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Entpd5Q9WUZ9 427 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Fer1l6E0CZ42 1862 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Cpsf2O35218 782 aaKnown RBP13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Tlr8P58682 1032 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 MagohP61327 146 aaKnown RBP13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Ddr1Q03146 911 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Sf3b2Q3UJB0 878 aaKnown RBP13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Skap1Q3UUV5 355 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Krt31Q61765 416 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Fgd5Q80UZ0 1219 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Kiaa0319lQ8K135 1048 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Dnajc28Q8VCE1 385 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 MagohbQ9CQL1 146 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Galnt15Q9D2N8 638 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 R3hdm1E9Q9Q2 1135 aaKnown RBP13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 FdxrQ61578 494 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Nap1l4Q78ZA7 375 aaKnown RBP13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Rnaseh2bQ80ZV0 308 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Gle1Q8R322 699 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 PpihQ9D868 188 aa13.3□□□□□ -0.28
Lig1-210ENSMUST00000165964 Togaram1Q6A070 1776 aaKnown RBP13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 Lrrc36Q3V0M2 755 aa13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 Klra5Q60652 266 aa13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 DcakdQ8BHC4 231 aaKnown RBP13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 Psmd5Q8BJY1 504 aa13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 Mageb16Q9CWV4 363 aa13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 Zbed3Q9D0L1 228 aa13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 Pramef12Q9D2F1 463 aa13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 Lrp2bpQ9D4C6 346 aa13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 Gfpt2Q9Z2Z9 682 aa13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 TicrrQ8BQ33 1889 aa13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 1700003F12RikA2AKE5 210 aa13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 Fam171a1A2ATK9 892 aa13.29□□□□□ -0.28
Lig1-210ENSMUST00000165964 Mpp3O88910 568 aa13.29□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms