RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 LrmpQ60664 539 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ephb1Q8CBF3 984 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Rev1Q920Q2 1249 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Arhgap23Q69ZH9 1483 aa12.58□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Stat3P42227 770 aaKnown RBP12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Cracr2aQ3UP38 310 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 StilQ60988 1262 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ccna1Q61456 421 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Phactr3Q8BYK5 558 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Vcpip1Q8CDG3 1220 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 YarsQ91WQ3 528 aaKnown RBP12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ubxn8Q9QZ49 277 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Rnpc3Q3UZ01 514 aaKnown RBP12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Fnbp1Q80TY0 616 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Pja2Q80U04 707 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Lonp1Q8CGK3 949 aaKnown RBP12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ehd4Q9EQP2 541 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Sash1P59808 1230 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ppp2r5eQ61151 467 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Lgi2Q8K4Z0 550 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 OtoaQ8K561 1137 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Olfr805Q8VFI4 319 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Mettl13Q91YR5 698 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ltb4r2Q9JJL9 360 aa12.58□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Uhrf1bp1B2KF50 1429 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Gbp6A0A0G2JDV3 611 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Serpinb3cA2RSF9 386 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Zfand4D3Z3C6 739 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Atp2a3Q64518 1038 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Zbtb39Q6PDK0 712 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Spire2Q8K1S6 718 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Coa7Q921H9 231 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Kdm8Q9CXT6 414 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 CacybpQ9CXW3 229 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Kcnb2A6H8H5 907 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 RcvrnP34057 202 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Nyap1Q6PFX7 833 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Cracr2bQ80ZJ8 394 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Wdr27Q8C5V5 780 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Pomgnt1Q91X88 660 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Mms19Q9D071 1031 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Epha2Q03145 977 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Cyp2c67Q569X9 491 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Sco1Q5SUC9 284 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ahcyl2Q68FL4 613 aaKnown RBP12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ccdc159Q8C963 411 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Cdk8Q8R3L8 464 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ankrd49Q8VE42 238 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ppp1r16bQ8VHQ3 568 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 PhbP67778 272 aaKnown RBP12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ric8aQ3TIR3 530 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 IqceQ6PCQ0 778 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ldlrap1Q8C142 308 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Psmd2Q8VDM4 908 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Pls3Q99K51 630 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Iqcf1Q9D9K8 182 aa12.57□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Sfi1Q3UZY0 1216 aaKnown RBP12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 PigsQ6PD26 555 aaKnown RBP12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 FtoQ8BGW1 502 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Inpp5bQ8K337 993 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Pcdhgc5Q91XW9 944 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Fmnl1Q9JL26 1094 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Crlf3Q9Z2L7 442 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Gm28036V9GXJ1 658 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Gm29133A0A1B0GT72 266 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Gm8994E9PV04 411 aaKnown RBP12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Men1O88559 611 aaKnown RBP12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Stat4P42228 749 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 ItgaeQ60677 1167 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Mettl24Q8CCB5 363 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Fbxo18Q8K2I9 1042 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Slc12a8Q8VI23 705 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Chn1Q91V57 459 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Sept12Q9D451 317 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Q9DAQ4 598 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Tmem2Q5FWI3 1383 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 FosP01101 380 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Cfap52Q5F201 620 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Senp6Q6P7W0 1132 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Tlr13Q6R5N8 991 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Actr5Q80US4 605 aaKnown RBP12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Mxd3Q80US8 206 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Tmem87aQ8BXN9 555 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Spats2lQ91WJ7 558 aaKnown RBP12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Zfyve19Q9DAZ9 389 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Speer3W4VSP1 261 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Adgrf5G5E8Q8 1348 aa12.56□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Rab20P35295 233 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Serpinb6Q60854 378 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Q6DFW0 481 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Dzip3Q7TPV2 1204 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Heatr3Q8BQM4 679 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Ppm1kQ8BXN7 372 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Atp2a1Q8R429 994 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Uap1Q91YN5 522 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Cul1Q9WTX6 776 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Mroh8E9PYI4 1049 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 DffaO54786 331 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 P2rx5Q3UYI1 455 aa12.55□□□□□ -0.4
Ndc1-204ENSMUST00000139560 Adck2Q6NSR3 617 aa12.55□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms