RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Cdca8Q8BHX3 289 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Fam49aQ8BHZ0 323 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Zfp120Q8BZW4 436 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Zmynd15Q8C0R7 736 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Ago3Q8CJF9 860 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Tmem60Q8K174 133 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Vwa1Q8R2Z5 415 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Slc25a38Q91XD8 326 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Necab2Q91ZP9 389 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Q922R1 422 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Saal1Q9D2C2 474 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Wfdc1Q9ESH5 211 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Mrvi1Q9WUX5 899 aaKnown RBP13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Htatip2Q9Z2G9 242 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Abcb11Q9QY30 1321 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Dnah12Q3V0Q1 3086 aa13.78□□□□□ -0.2
Ccdc28b-202ENSMUST00000106035 Gm4924A0A1B0GR71 966 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Svs3aF2Z472 265 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Lrrc32G3XA59 663 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Esr2O08537 530 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Clk2O35491 499 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Rgs9O54828 675 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 EnamO55196 1274 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Tnfaip1O70479 316 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Kcnma1Q08460 1209 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ap5z1Q3U829 807 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 C87499Q3UX49 493 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Fam198aQ3UY90 562 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Madcam1Q61826 405 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Tgoln2Q62314 363 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ntan1Q64311 310 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ccdc189Q6NZQ0 333 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Serpinb3dQ6UKZ0 387 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Map3k11Q80XI6 850 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Trim47Q8C0E3 641 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Vopp1Q8R1C3 172 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Foxe1Q8R2I0 371 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 NptxrQ99J85 493 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Rtfdc1Q99K95 307 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ly6kQ9CWP4 154 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Tmem192Q9CXT7 266 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Polr3eQ9CZT4 710 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Krt34Q9D646 392 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ddx21Q9JIK5 851 aaKnown RBP13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Vav3Q9R0C8 847 aa13.77□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Map7d1A2AJI0 846 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Gm3095E9Q058 166 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Vmn2r55G3UWZ4 781 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Vmn2r53L7N473 806 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Rgs2O08849 211 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 PrkceP16054 737 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Cxcl12P40224 93 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Syt1P46096 421 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Tmod1P49813 359 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Sox1P53783 391 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Kcnn2P58390 839 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Tarbp2P97473 365 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Gjb4Q02738 266 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ctnna3Q65CL1 895 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 ChpfQ6IQX7 774 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 GmipQ6PGG2 971 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Plppr4Q7TME0 766 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Ppme1Q8BVQ5 386 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Clec1aQ8BWY2 269 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Glis1Q8K1M4 789 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Tcf25Q8R3L2 676 aaKnown RBP13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Myo1hQ9D6A1 958 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 PigoQ9JJI6 1093 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Mtmr1Q9Z2C4 669 aa13.76□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Fam209A2APA5 170 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Xpnpep3B7ZMP1 506 aaKnown RBP13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Zfp213E9QAW0 468 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Gm8909G3UXE9 396 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Il4rP16382 810 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Dnm1P39053 867 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Resp18P47939 175 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 FanccP50652 591 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 PklrP53657 574 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Psmc5P62196 406 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Dph1Q5NCQ5 438 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Cyp4x1Q6A152 507 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Atp6v0d2Q80SY3 350 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Fut11Q8BHC9 489 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Znf689Q8BKK5 500 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Zmym6Q8BS54 1249 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Nemp2Q8CB65 421 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Colgalt1Q8K297 617 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Hs2st1Q8R3H7 356 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Rpn1Q91YQ5 608 aaKnown RBP13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Trim59Q922Y2 403 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Tbc1d15Q9CXF4 671 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Susd3Q9D176 269 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Sertad1Q9JL10 236 aa13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Baz2aQ91YE5 1889 aaKnown RBP13.75□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Igkv18-36A0A075B5M9 114 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Mroh8E9PYI4 1049 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 UgcgO88693 394 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Apba3O88888 571 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Gfpt1P47856 697 aa13.74□□□□□ -0.21
Ccdc28b-202ENSMUST00000106035 Nlrp2Q4PLS0 1046 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms