RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 P4hbP09103 509 aaKnown RBP13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Irf8P23611 424 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Cct6aP80317 531 aaKnown RBP13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Fgfr4Q03142 799 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Zc3h15Q3TIV5 426 aaKnown RBP13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Spdye4aQ5IBH6 268 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Msantd2Q6NZR2 559 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Spata21Q8BHW6 681 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Chtf18Q8BIW9 969 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Btnl9Q8BJE2 536 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Prl7b1Q8CGZ9 251 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Trappc12Q8K2L8 797 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Nup58Q8R332 587 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Rfc4Q99J62 364 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Usp26Q99MX1 835 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Krtap5-3Q9D226 196 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 SerhlQ9EPB5 311 aa13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Prpf40aQ9R1C7 953 aaKnown RBP13.44□□□□□ -0.26
Actb-201ENSMUST00000100497 Nfxl1E9Q8I7 918 aaKnown RBP13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Ankrd35E9Q9D8 996 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Cyp2c68K7N6C2 491 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Tagap1P0CAX8 505 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Serpina1eQ00898 413 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Cep126Q0VBV7 1103 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 YdjcQ14BV6 310 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Pbxip1Q3TVI8 727 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Mier3Q3UHF3 551 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Znf827Q505G8 1078 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Gm11437Q5QR91 290 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Foxd1Q61345 456 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 NntQ61941 1086 aaKnown RBP13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Irak1Q62406 710 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Sorbs1Q62417 1290 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Fgfr1opQ66JX5 399 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Dhx37Q6NZL1 1150 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Lrig3Q6P1C6 1117 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Senp7Q8BUH8 1037 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Hook3Q8BUK6 718 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Vps52Q8C754 723 aaKnown RBP13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Krt222Q8CCX5 294 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Cacnb1Q8R3Z5 597 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 CbsQ91WT9 561 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Prpf6Q91YR7 941 aaKnown RBP13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Smco2Q9DA21 347 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Nfatc2ipO09130 412 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Tp53P02340 387 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Gjb6P70689 261 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Stim2P83093 746 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Tmprss11eQ5S248 423 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Krit1Q6S5J6 736 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Fbxo2Q80UW2 297 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Efcab8Q8C9R9 203 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Ccdc73Q8CDM4 1066 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Med24Q99K74 987 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Npm3Q9CPP0 175 aaKnown RBP13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Ppil2Q9D787 521 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Fthl17aQ9DAX0 182 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Kcnh7Q9ER47 1195 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Slc15a2Q9ES07 729 aa13.43□□□□□ -0.26
Actb-201ENSMUST00000100497 Zfp597E9Q6S0 419 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Gm4758L7N258 96 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Flot1O08917 428 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 ArP19091 899 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Pik3r1P26450 724 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Dpcr1Q3TNW5 500 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Rnf180Q3U827 592 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Prr7Q3V0I2 269 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Tom1l2Q5SRX1 507 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Shc3Q61120 474 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Recql4Q75NR7 1216 aaKnown RBP13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Usp17leQ7M764 540 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Fbxo28Q8BIG4 368 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 PdxkQ8K183 312 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Dusp19Q8K4T5 220 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Vta1Q9CR26 309 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Tmem79Q9D709 391 aa13.42□□□□□ -0.26
Actb-201ENSMUST00000100497 Odf2A3KGV1 830 aaKnown RBP13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Gm4907B1AXB9 411 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Gm38392E9Q2A2 434 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Serpinb8O08800 374 aaKnown RBP13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Kcna3P16390 528 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Lmnb2P21619 596 aaKnown RBP13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Mmp20P57748 482 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Pla2g6P97819 807 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Trim43aQ3TL54 445 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Gpr162Q3UN16 588 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Tmem232Q5K6N0 675 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Krt15Q61414 452 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Krt31Q61765 416 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Sp4Q62445 782 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Exoc3Q6KAR6 755 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Mapk4Q6P5G0 583 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 H6pdQ8CFX1 789 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Tdrd3Q91W18 743 aaKnown RBP13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Q9CYI0 393 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Cse1lQ9ERK4 971 aaKnown RBP13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Arhgef7Q9ES28 862 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Nova2D3YVV7 556 aaKnown RBP13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Pagr1bF6V0H0 108 aa13.41□□□□□ -0.26
Actb-201ENSMUST00000100497 Serpinb6bO08804 377 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms