RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Nck2O55033 380 aa13.66□□□□□ -0.22
Lig3-202ENSMUST00000080461 Nmt1O70310 496 aaKnown RBP13.66□□□□□ -0.22
Lig3-202ENSMUST00000080461 Dnm2P39054 870 aaKnown RBP13.66□□□□□ -0.22
Lig3-202ENSMUST00000080461 Traf5P70191 558 aa13.66□□□□□ -0.22
Lig3-202ENSMUST00000080461 Tmem35bQ3U0Y2 150 aa13.66□□□□□ -0.22
Lig3-202ENSMUST00000080461 Cracr2bQ80ZJ8 394 aa13.66□□□□□ -0.22
Lig3-202ENSMUST00000080461 Btnl9Q8BJE2 536 aa13.66□□□□□ -0.22
Lig3-202ENSMUST00000080461 Ppp1r3aQ99MR9 1089 aa13.66□□□□□ -0.22
Lig3-202ENSMUST00000080461 Myl7Q9QVP4 175 aa13.66□□□□□ -0.22
Lig3-202ENSMUST00000080461 AunipE9Q6Z5 340 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 SpibO35906 267 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 AgtP11859 477 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 SarsP26638 512 aaKnown RBP13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Pola2P33611 600 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Col9a2Q07643 688 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Sec31aQ3UPL0 1230 aaKnown RBP13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Entpd3Q8BFW6 529 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 GanQ8CA72 597 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Bbs7Q8K2G4 715 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Ttc8Q8VD72 515 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Ribc1Q9D0B8 379 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Lrrc38A2VDH3 298 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Kcna2P63141 499 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Taf1bP97358 586 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Mier3Q3UHF3 551 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Znf532Q6NXK2 1036 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Traf3ip3Q8C0G2 513 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Spata4Q8K3V1 295 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Kif17Q99PW8 1038 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Ccdc43Q9CR29 222 aaKnown RBP13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Cmtr1Q9DBC3 837 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Sbno2Q7TNB8 1349 aa13.65□□□□□ -0.22
Lig3-202ENSMUST00000080461 Actn3O88990 900 aaKnown RBP13.65□□□□□ -0.23
Lig3-202ENSMUST00000080461 Cd68P31996 326 aa13.65□□□□□ -0.23
Lig3-202ENSMUST00000080461 Lig1P37913 916 aa13.65□□□□□ -0.23
Lig3-202ENSMUST00000080461 Actn4P57780 912 aaKnown RBP13.65□□□□□ -0.23
Lig3-202ENSMUST00000080461 Cbx1P83917 185 aaKnown RBP13.65□□□□□ -0.23
Lig3-202ENSMUST00000080461 RragaQ80X95 313 aa13.65□□□□□ -0.23
Lig3-202ENSMUST00000080461 Rusc1Q8BG26 893 aa13.65□□□□□ -0.23
Lig3-202ENSMUST00000080461 Bcs1lQ9CZP5 418 aa13.65□□□□□ -0.23
Lig3-202ENSMUST00000080461 Tube1Q9D6T1 475 aa13.65□□□□□ -0.23
Lig3-202ENSMUST00000080461 Myh11O08638 1972 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Idh1O88844 414 aaKnown RBP13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Ccnd3P30282 292 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Nkx2-5P42582 318 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Ankrd13cQ3UX43 541 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Sh2d1b2Q45HK4 132 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Antxr2Q6DFX2 487 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Syne4Q8CII8 388 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Fam13bQ8K2H3 851 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 OtoaQ8K561 1137 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Traf7Q922B6 594 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Disp2Q8CIP5 1345 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Zgrf1Q0VGT4 1863 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 ByslO54825 436 aaKnown RBP13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Fgfr4Q03142 799 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Kcnma1Q08460 1209 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Cep126Q0VBV7 1103 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Tgoln2Q62314 363 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Mindy1Q76LS9 468 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Actn1Q7TPR4 892 aaKnown RBP13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Hsdl1Q8BTX9 330 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Rcor2Q8C796 523 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Fam76aQ922G2 307 aa13.64□□□□□ -0.23
Lig3-202ENSMUST00000080461 Kcnk18Q6VV64 394 aa13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 Zdhhc15Q8BGJ0 337 aa13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 Adcy3Q8VHH7 1145 aa13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 FibpQ9JI19 357 aa13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 Ttll10A4Q9F3 704 aa13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 Cnbd1B1AWM0 430 aa13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 UgcgO88693 394 aa13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 Psmc5P62196 406 aa13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 Cacna2d4Q5RJF7 1116 aa13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 Fndc3bQ6NWW9 1207 aaKnown RBP13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 Msantd2Q6NZR2 559 aa13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 Pym1Q8CHP5 203 aaKnown RBP13.63□□□□□ -0.23
Lig3-202ENSMUST00000080461 1700018F24RikB2RW27 314 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Nfxl1E9Q8I7 918 aaKnown RBP13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Tnfrsf11aO35305 625 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Per1O35973 1291 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Eif3dO70194 548 aaKnown RBP13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Nr2f2P43135 414 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Mcm5P49718 733 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Ncoa7Q6DFV7 943 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Nsun6Q7TS68 476 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Lrrc24Q8BHA1 521 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 IrgqQ8VIM9 583 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Lpin2Q99PI5 893 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 ChmQ9QXG2 665 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Ttc38A3KMP2 465 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Slc4a9E9PUP3 929 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Zfp213E9QAW0 468 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Gucy1b3O54865 620 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Slc16a2O70324 545 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Got1P05201 413 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Gm10392Q3V3I3 114 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Tmem232Q5K6N0 675 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Chtf18Q8BIW9 969 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Mrgprx1Q8CIP3 322 aa13.62□□□□□ -0.23
Lig3-202ENSMUST00000080461 Srgap2Q91Z67 1071 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 73.7 ms