RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Fam76aQ922G2 307 aa12.44□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Col24a1Q30D77 1733 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Apol6B7ZC55 329 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ube3aO08759 870 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Per1O35973 1291 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Tp53P02340 387 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ifnar1P33896 590 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Paxbp1P58501 919 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Psmc5P62196 406 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Zc3h18Q0P678 948 aaKnown RBP12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 KhsrpQ3U0V1 748 aaKnown RBP12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Tcf12Q61286 706 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Sema4bQ62179 823 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Znf618Q80YY7 953 aaKnown RBP12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Gpr180Q8BPS4 441 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Pgm5Q8BZF8 567 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 MtrrQ8C1A3 696 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 PycardQ9EPB4 193 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 ChmQ9QXG2 665 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Psma7Q9Z2U0 248 aa12.43□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Gm28042B7ZCM9 1014 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Kcnh2O35219 1162 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ess2O70279 479 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Got1P05201 413 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Edem3Q2HXL6 931 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Q3UJP5 209 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Gprin1Q3UNH4 932 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Znf827Q505G8 1078 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ccdc42Q5SV66 316 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ppp1r13bQ62415 1087 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Kiaa0754Q69ZZ9 979 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Mettl25Q6NXH8 597 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Dhx37Q6NZL1 1150 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Dync1li2Q6PDL0 492 aaKnown RBP12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 E2f7Q6S7F2 904 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 PicalmQ7M6Y3 660 aaKnown RBP12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Atg4cQ811C2 458 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ireb2Q811J3 963 aaKnown RBP12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Maats1Q8BRC6 783 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 EtnpplQ8BWU8 499 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 NkrfQ8BY02 690 aaKnown RBP12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 SucoQ8C341 1250 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ppfibp1Q8C8U0 969 aaKnown RBP12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Enox2Q8R0Z2 598 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ccdc12Q8R344 166 aaKnown RBP12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Atp1a1Q8VDN2 1023 aaKnown RBP12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Q9D5Q8 446 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ddx25Q9QY15 484 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Klra10Q9R1G6 266 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Mrvi1Q9WUX5 899 aaKnown RBP12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Lamb2Q61292 1799 aa12.42□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Trpm7Q923J1 1863 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 A0A286YCQ6 122 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Pus7B7ZNL8 666 aaKnown RBP12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Akap2O54931 893 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Nmt1O70310 496 aaKnown RBP12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Magea1O89006 320 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Cd68P31996 326 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 SnrpfP62307 86 aaKnown RBP12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Krt86P97861 486 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ccdc102aQ3TMW1 549 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Znf354cQ571J5 560 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Taf3Q5HZG4 932 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Cct6bQ61390 531 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 GartQ64737 1010 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ctnna3Q65CL1 895 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Scaf8Q6DID3 1268 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Kcnk18Q6VV64 394 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Nsun6Q7TS68 476 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 RragaQ80X95 313 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Hgh1Q8C3I8 393 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Cd2bp2Q9CWK3 342 aaKnown RBP12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Erp44Q9D1Q6 406 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Slc34a2Q9DBP0 697 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Stk32bQ9JJX8 414 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Fzd9Q9R216 592 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Magea2Q9R2A2 320 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Trip11E9Q512 1976 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Cntnap2Q9CPW0 1332 aa12.41□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Gm45194A0A140LJG2 572 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Cpb1B2RS76 415 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Serpinb8O08800 374 aaKnown RBP12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Atp9aO70228 1047 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Adamts10P58459 1104 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Tubb4bP68372 445 aaKnown RBP12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ubxn2bQ0KL01 331 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Tcerg1lQ3B807 590 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Wdr70Q3TWF6 657 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Abhd15Q5F2F2 459 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 CtcfQ61164 736 aaKnown RBP12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Exoc3Q6KAR6 755 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Ttc7aQ8BGB2 858 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Frmd3Q8BHD4 595 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Lca5lQ8C0X0 741 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Iws1Q8C1D8 766 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Bicdl2Q8CHW5 507 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Vps18Q8R307 973 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 CbsQ91WT9 561 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Pcdhgc5Q91XW9 944 aa12.4□□□□□ -0.42
Vamp1-202ENSMUST00000063588 Pls3Q99K51 630 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms