RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Oxct2bQ9ESL0 520 aa9.18□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Chd2E9PZM4 1827 aaKnown RBP9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Kdm5aQ3UXZ9 1690 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Tmem131lQ3U3D7 1597 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Hfm1D3Z4R1 1434 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Anapc15-psA0A140T8L6 141 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Mindy4b-psA0A1W2P7H6 457 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Chrna10B2RX82 447 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Ccdc175E9PVB3 822 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Hmgxb3G3X9M3 1254 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Cdr2P97817 455 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Ddb1Q3U1J4 1140 aaKnown RBP9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Bricd5Q8BV89 174 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 BlmhQ8R016 455 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Grin3bQ91ZU9 1003 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 1700129C05RikQ9CQ77 218 aa9.17□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Lamc1P02468 1607 aaKnown RBP9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Robo2Q7TPD3 1470 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Sall3Q62255 1320 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Frmd7A2AD83 703 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Izumo3A6PWV3 263 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Guca2bO09051 106 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Zfp36P22893 319 aaKnown RBP9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 PfkmP47857 780 aaKnown RBP9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Gucy2fQ5SDA5 1108 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Smad2Q62432 467 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Tbr1Q64336 681 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Slc6a17Q8BJI1 727 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Smad3Q8BUN5 425 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Ccdc187Q8C5V8 958 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Bcas3Q8CCN5 928 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Il17rdQ8JZL1 738 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Acap1Q8K2H4 740 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 HnrnpllQ921F4 591 aaKnown RBP9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Nkd1Q99MH6 471 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Spata9Q9D9R3 252 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Aldh6a1Q9EQ20 535 aaKnown RBP9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Scyl1Q9EQC5 806 aaKnown RBP9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Dpysl5Q9EQF6 564 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Adam23Q9R1V7 829 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Rad9aQ9Z0F6 389 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 ArtnQ9Z0L2 224 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Rimbp3Q3V0F0 1606 aa9.16□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Asxl1P59598 1514 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Veph1A1A535 833 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Gm4907B1AXB9 411 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Pdzd8B9EJ80 1147 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Gm8994E9PV04 411 aaKnown RBP9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Cyp2w1E9Q816 493 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 TstP52196 297 aaKnown RBP9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Hhla1Q3TYV2 514 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Fxr1Q61584 677 aaKnown RBP9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Nlgn2Q69ZK9 836 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 B4galnt4Q766D5 1034 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 PhkbQ7TSH2 1085 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Grik4Q8BMF5 956 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 LdahQ8BVA5 326 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Ccdc150Q8CDI7 1110 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Fez1Q8K0X8 392 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Vmn1r89Q8R256 316 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Actl6bQ99MR0 426 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Lmbr1Q9JIT0 490 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Sorbs3Q9R1Z8 733 aa9.15□□□□□ -0.94
Ccdc54-201ENSMUST00000062439 Adgrb3Q80ZF8 1522 aa9.15□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Kif13aQ9EQW7 1749 aa9.14□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Mia2Q91ZV0 1396 aa9.14□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Spats1A2RRY8 269 aa9.14□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Il22ra2Q80XF5 230 aa9.14□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Anks1bQ8BIZ1 1259 aa9.14□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Snip1Q8BIZ6 383 aaKnown RBP9.14□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Trappc12Q8K2L8 797 aa9.14□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Neil1Q8K4Q6 389 aa9.14□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Rad51cQ924H5 366 aa9.14□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Srpk3Q9Z0G2 565 aa9.14□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Ino80Q6ZPV2 1559 aa9.13□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Smad5P97454 465 aa9.13□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Palb2Q3U0P1 1104 aa9.13□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Paqr3Q6TCG8 311 aa9.13□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Elac2Q80Y81 831 aaKnown RBP9.13□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Mical2Q8BML1 960 aa9.13□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Oas3Q8VI93 1138 aaKnown RBP9.13□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Clstn2Q9ER65 966 aa9.13□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Fhad1A6PWD2 1420 aa9.13□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Nup155Q99P88 1391 aaKnown RBP9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Clip3B9EHT4 547 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Gli1P47806 1111 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Ppp3caP63328 521 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Ankrd40Q5SUE8 363 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Shq1Q7TMX5 569 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 FsbpQ8BKE5 299 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Prpf18Q8BM39 342 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Nlrp4bQ8C6J9 863 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Tsr2Q8C8T8 191 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Ca12Q8CI85 354 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 SdhaQ8K2B3 664 aaKnown RBP9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Gfod2Q9CYH5 385 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Scamp4Q9JKV5 230 aa9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 AatfQ9JKX4 526 aaKnown RBP9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 Sart3Q9JLI8 962 aaKnown RBP9.12□□□□□ -0.95
Ccdc54-201ENSMUST00000062439 AnkarA2RT91 1465 aa9.12□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms