RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Kansl1lQ5DTI6 991 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Rsad1Q5SUV1 442 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Paxip1Q6NZQ4 1056 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Dusp4Q8BFV3 398 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Armcx3Q8BHS6 379 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Btnl9Q8BJE2 536 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Snap47Q8R570 413 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Rpap3Q9D706 660 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Wfdc16A2A5H4 111 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Cyp11b2P15539 500 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Lig1P37913 916 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Nr2f2P43135 414 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 StamP70297 548 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 GclcP97494 637 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Gucy2cQ3UWA6 1072 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Olfr121Q5CZY0 321 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Cln3Q61124 438 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Nab2Q61127 525 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ipo5Q8BKC5 1097 aaKnown RBP9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Traf3ip3Q8C0G2 513 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ints4Q8CIM8 964 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Fgd4Q91ZT5 766 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 March8Q9DBD2 286 aa9.6□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ace3D0G895 737 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Il2rbP16297 539 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Mrgprb1Q3UG61 350 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Znf827Q505G8 1078 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 TbataQ7TSD4 393 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Dnph1Q80VJ3 173 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Pxylp1Q8BHA9 480 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Fam20aQ8CID3 541 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Slc14a1Q8VHL0 384 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Grin3bQ91ZU9 1003 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Katnbl1Q9CWJ3 299 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 DexiQ9WUQ7 95 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Fam205aA2APU8 1308 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Nfxl1E9Q8I7 918 aaKnown RBP9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Serpina1aP07758 413 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Serpina1bP22599 413 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Epb41l4aP52963 686 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Il6stQ00560 917 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Serpina1cQ00896 412 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Serpina1dQ00897 413 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Dcaf17Q3TUL7 519 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Mindy4Q3UQI9 744 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tpd52Q62393 224 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ddx10Q80Y44 875 aaKnown RBP9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Pank4Q80YV4 820 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Azin2Q8BVM4 459 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 H2-Q4Q8HWB2 354 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Dnajc17Q91WT4 303 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ccdc43Q9CR29 222 aaKnown RBP9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ush1cQ9ES64 910 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Plod3Q9R0E1 741 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Gm5580A0A0N4SVP8 411 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ttc38A3KMP2 465 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Serpinb8O08800 374 aaKnown RBP9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tpm3P21107 285 aaKnown RBP9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Mcm5P49718 733 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Pstpip1P97814 415 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Trmt1Q3TX08 663 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 EregQ61521 162 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tgoln2Q62314 363 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ces1eQ64176 562 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Gja3Q64448 417 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tpm4Q6IRU2 248 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Map1sQ8C052 973 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 GanQ8CA72 597 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 MafaQ8CF90 359 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Nrbp2Q91V36 499 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Ddx41Q91VN6 622 aaKnown RBP9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Tm4sf4Q91XD3 202 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Znf687Q9D2D7 1237 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Nudt12Q9DCN1 462 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Hic1Q9R1Y5 733 aa9.59□□□□□ -0.87
Trim39-201ENSMUST00000042717 Thsd7bQ6P4U0 1607 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Astn1Q61137 1302 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Abcb11Q9QY30 1321 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Olfr67F8VPJ8 320 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Cd70O55237 195 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Hoxc13P50207 328 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Hmgb1P63158 215 aaKnown RBP9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 NfiaQ02780 532 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Zfp781Q0P5U5 243 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Prmt6Q6NZB1 378 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Rtp1Q8C8C1 263 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Bbs7Q8K2G4 715 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Tas1r1Q99PG6 842 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ccdc89Q9DA73 370 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Mxra8Q9DBV4 442 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Lrrc38A2VDH3 298 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Cetn3O35648 167 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Trdmt1O55055 415 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Bcat1P24288 386 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Adamts19P59509 1210 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Ly9Q01965 654 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Cdkn2aipQ8BI72 563 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 EtnpplQ8BWU8 499 aa9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 NkrfQ8BY02 690 aaKnown RBP9.58□□□□□ -0.88
Trim39-201ENSMUST00000042717 Zmynd15Q8C0R7 736 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms