RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Copg1Q9QZE5 874 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Krt78E9Q0F0 1068 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Rpn1Q91YQ5 608 aaKnown RBP17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Def8Q99J78 448 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Hspa2P17156 633 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Bfsp2Q6NVD9 416 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ddx55Q6ZPL9 600 aaKnown RBP17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gm28961A0A087WPA5 222 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gm21858A0A087WQ24 222 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Akap17bA2A3V1 959 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gm10250G3X9L6 160 aaKnown RBP17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Trmt44Q9D2Q2 713 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Atp5hQ9DCX2 161 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Cog1Q9Z160 980 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Disp3A3KFU9 1347 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gm8879F6R3J9 157 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gm17615E9Q9P2 165 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Rasa3Q60790 834 aa17.73■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Akr1b10G5E895 316 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Vmn2r78K7N6U5 853 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Dab2ipQ3UHC7 1189 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Q8BWG4 1187 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Akt3Q9WUA6 479 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Lzts3A2AHG0 700 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Lrrc32G3XA59 663 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Stat5bP42232 786 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 NficP70255 439 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gfpt2Q9Z2Z9 682 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 DnttP09838 530 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ankrd42Q3V096 527 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Sap130Q8BIH0 1057 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Pbxip1Q3TVI8 727 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Fbxl5Q8C2S5 690 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Myo1cQ9WTI7 1063 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Myh7bA2AQP0 1941 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Zyg11aA2BFL2 627 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Yipf3Q3UDR8 347 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ppp2r2aQ6P1F6 447 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Wdr27Q8C5V5 780 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Nek9Q8K1R7 984 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Pms2P54279 859 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Rnf10Q3UIW5 804 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ptk6Q64434 451 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Vps39Q8R5L3 886 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Chl1P70232 1209 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Tbc1d30Q69ZT9 766 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Stkld1Q80YS9 662 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Clic6Q8BHB9 596 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Prpf3Q922U1 683 aaKnown RBP17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 PxdnQ3UQ28 1475 aa17.72■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ddx19bQ8BZY3 494 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Abcc3B2RX12 1523 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Slc9a2Q3ZAS0 814 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 PrimpolQ6P1E7 537 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Tk2Q9R088 270 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Gm5861F6VCN9 180 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 4933402N22RikF7D1B3 190 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 P4hbP09103 509 aaKnown RBP17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 RenbpP82343 430 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Pnpt1Q8K1R3 783 aaKnown RBP17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Cep126Q0VBV7 1103 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Best2Q8BGM5 508 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Tcof1O08784 1320 aaKnown RBP17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Nova2D3YVV7 556 aaKnown RBP17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Prl3b1P09586 222 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Atp5c1Q91VR2 298 aaKnown RBP17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Thumpd2Q9CZB3 528 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Slc25a13Q9QXX4 676 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Parp3Q3ULW8 533 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Meis1Q60954 390 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Vps37aQ8CHS8 397 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Ola1Q9CZ30 396 aaKnown RBP17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Angptl2Q9R045 493 aa17.71■□□□□ 0.43
Ccdc88a-201ENSMUST00000040182 Iqca1lA6H690 825 aa17.71■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Alkbh8Q80Y20 664 aa17.71■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Tp53bp2Q8CG79 1128 aa17.71■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Slc8a2Q8K596 921 aa17.71■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Gm8922F6XVS9 199 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Nlrp4eQ66X19 978 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ube4aE9Q735 1028 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Cdh2P15116 906 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Polr3eQ9CZT4 710 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 CinpQ9D0V8 212 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Tnni1Q9WUZ5 187 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Kif20bQ80WE4 1774 aaKnown RBP17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 GssP51855 474 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 RnaselQ05921 735 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ect2Q07139 913 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 ArpinQ9D0A3 226 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Sun1Q9D666 913 aaKnown RBP17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Arhgap23Q69ZH9 1483 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Pde8bE9Q4S1 865 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Sema3eP70275 775 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Asap2Q7SIG6 958 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Uap1Q91YN5 522 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Stk39Q9Z1W9 556 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Trim28Q62318 834 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 RubcnQ80U62 956 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Ranbp17Q99NF8 1088 aa17.7■□□□□ 0.42
Ccdc88a-201ENSMUST00000040182 Cdk12Q14AX6 1484 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms