RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 ErfeQ6PGN1 340 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 PodnQ7TQ62 611 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Lrfn2Q80TG9 788 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Them6Q80ZW2 207 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Sertad1Q9JL10 236 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Abcb1bP06795 1276 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 DSCC1Q14AI0 399 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ncoa7Q6DFV7 943 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ccdc85bQ6PDY0 202 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Tmem164Q6PHN7 296 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Znf12Q7TSI0 686 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Med7Q9CZB6 233 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Syngap1F6SEU4 1340 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Trmt1lA2RSY6 728 aaKnown RBP11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Sptlc1O35704 473 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Xrcc5P27641 732 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ppp4cP97470 307 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Slc9a2Q3ZAS0 814 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Pde1aQ61481 565 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 ChpfQ6IQX7 774 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gtf2a2Q80ZM7 109 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 LRWD1Q8BUI3 648 aaKnown RBP11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 VcpkmtQ8C436 228 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Bicdl2Q8CHW5 507 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Plekha4Q8VC98 588 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gm10093D3YYI8 482 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Fam124aD3Z5V4 536 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Hdac1O09106 482 aaKnown RBP11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Trim21Q62191 470 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Baiap3Q80TT2 1134 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Best2Q8BGM5 508 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Me3Q8BMF3 604 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Slc7a14Q8BXR1 771 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Arhgef7Q9ES28 862 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Eif3j1Q3UGC7 261 aaKnown RBP11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Cyp4f37Q3V1F1 546 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Maats1Q8BRC6 783 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 Snx29Q9D3S3 818 aa11.49□□□□□ -0.57
Limch1-201ENSMUST00000038188 GabreA2AMW3 916 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Vmn2r55G3UWZ4 781 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Vmn2r53L7N473 806 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 ImpactO55091 318 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ipo5Q8BKC5 1097 aaKnown RBP11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Emc2Q9CRD2 297 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Htatip2Q9Z2G9 242 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Kiaa0232Q80U59 1396 aaKnown RBP11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gna14P30677 355 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 GckP52792 465 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Sh3bp1P55194 680 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Nsun7Q14AW5 724 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gemin4Q6P6L6 1058 aaKnown RBP11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Atp1a3Q6PIC6 1013 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Wdr27Q8C5V5 780 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Nek9Q8K1R7 984 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Cd2apQ9JLQ0 637 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Extl3Q9WVL6 918 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ulk4Q3V129 1303 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Rnf123Q5XPI3 1314 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Pabpc1lA2A5N3 607 aaKnown RBP11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gp6P0C191 313 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Pald1P70261 859 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Vwa3aQ3UVV9 1148 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Tmx1Q8VBT0 278 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Tspan3Q9QY33 253 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Clic4Q9QYB1 253 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Rabgap1lA6H6A9 815 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Cyp3a59D3Z2W7 503 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Cxcl12P40224 93 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Wee2Q66JT0 555 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Snx13Q6PHS6 957 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ccdc25Q78PG9 208 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Fra10ac1Q8BP78 315 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Rsad2Q8CBB9 362 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Serpinb12Q9D7P9 423 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gm16430A6X8J1 155 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 NsfP46460 744 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Zfp781Q0P5U5 243 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Esyt2Q3TZZ7 845 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ctdspl2Q8BG15 465 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 Slc5a5Q99PN0 618 aa11.48□□□□□ -0.57
Limch1-201ENSMUST00000038188 RictorQ6QI06 1708 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Dcpp2E9PYC2 171 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Dcpp1L7N1X9 171 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Pde1bQ01065 535 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Afg1lQ3V384 480 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Rnf168Q80XJ2 565 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Pi4kbQ8BKC8 816 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Hgh1Q8C3I8 393 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 JcadQ5DTX6 1320 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Supt3B0QZW4 406 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Efna5O08543 228 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Apba3O88888 571 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Mettl14Q3UIK4 456 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Q80Y73 168 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 3830417A13RikQ8BQJ2 303 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Sept11Q8C1B7 431 aaKnown RBP11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gprc5cQ8K3J9 440 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Upf1Q9EPU0 1124 aaKnown RBP11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Fam205a1D3YZF6 1314 aa11.47□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ppp1r12cQ3UMT1 782 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms