RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Otud7bB2RUR8 840 aa25.3■■□□□ 1.64
Cln6-201ENSMUST00000034776 Pik3r1P26450 724 aa25.3■■□□□ 1.64
Cln6-201ENSMUST00000034776 Slc12a8Q8VI23 705 aa25.3■■□□□ 1.64
Cln6-201ENSMUST00000034776 Pcdhb12Q91Y07 789 aa25.3■■□□□ 1.64
Cln6-201ENSMUST00000034776 Ppp1r3aQ99MR9 1089 aa25.3■■□□□ 1.64
Cln6-201ENSMUST00000034776 Rnaseh2aQ9CWY8 301 aa25.3■■□□□ 1.64
Cln6-201ENSMUST00000034776 Ddx25Q9QY15 484 aa25.3■■□□□ 1.64
Cln6-201ENSMUST00000034776 Magea4F2Z493 315 aa25.29■■□□□ 1.64
Cln6-201ENSMUST00000034776 Mmp15O54732 657 aa25.29■■□□□ 1.64
Cln6-201ENSMUST00000034776 Pgrmc1O55022 195 aa25.29■■□□□ 1.64
Cln6-201ENSMUST00000034776 Dync1i1O88485 628 aa25.29■■□□□ 1.64
Cln6-201ENSMUST00000034776 Maats1Q8BRC6 783 aa25.29■■□□□ 1.64
Cln6-201ENSMUST00000034776 Olfr805Q8VFI4 319 aa25.29■■□□□ 1.64
Cln6-201ENSMUST00000034776 Ccdc43Q9CR29 222 aaKnown RBP25.29■■□□□ 1.64
Cln6-201ENSMUST00000034776 Psma7Q9Z2U0 248 aa25.29■■□□□ 1.64
Cln6-201ENSMUST00000034776 Klhdc7aA2APT9 773 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Dcaf15Q6PFH3 600 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Ctdp1Q7TSG2 960 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 PycardQ9EPB4 193 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Cntnap2Q9CPW0 1332 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Gm44503E9PYU5 387 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Ube3aO08759 870 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Slc16a2O70324 545 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Tp53P02340 387 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Senp1P59110 640 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Etv6P97360 485 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Neurl1bQ0MW30 546 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 E2f7Q6S7F2 904 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Usp17leQ7M764 540 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Rbp7Q9EPC5 134 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Klra17Q9JMA4 273 aa25.28■■□□□ 1.64
Cln6-201ENSMUST00000034776 Fam129cD3YZB0 591 aa25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Prkg1P0C605 671 aa25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Cct6bQ61390 531 aa25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Cdc23Q8BGZ4 597 aa25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Epc2Q8C0I4 808 aa25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Cyp11b2P15539 500 aa25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Hoxc10P31257 342 aa25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Ddx3yQ62095 658 aaKnown RBP25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 GartQ64737 1010 aa25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Serpinb13Q8CDC0 389 aa25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Eif4a3Q91VC3 411 aaKnown RBP25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Erp44Q9D1Q6 406 aa25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Dpp7Q9ET22 506 aa25.27■■□□□ 1.64
Cln6-201ENSMUST00000034776 Pth1rP41593 591 aa25.26■■□□□ 1.63
Cln6-201ENSMUST00000034776 Eepd1Q3TGW2 569 aa25.26■■□□□ 1.63
Cln6-201ENSMUST00000034776 Tubb2aQ7TMM9 445 aa25.26■■□□□ 1.63
Cln6-201ENSMUST00000034776 SucoQ8C341 1250 aa25.26■■□□□ 1.63
Cln6-201ENSMUST00000034776 OtoaQ8K561 1137 aa25.26■■□□□ 1.63
Cln6-201ENSMUST00000034776 Bco2Q99NF1 532 aa25.26■■□□□ 1.63
Cln6-201ENSMUST00000034776 Tubb2bQ9CWF2 445 aa25.26■■□□□ 1.63
Cln6-201ENSMUST00000034776 NapgQ9CWZ7 312 aa25.26■■□□□ 1.63
Cln6-201ENSMUST00000034776 Tcerg1lQ3B807 590 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 Hspa4Q61316 841 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 Kiaa0391Q8JZY4 584 aaKnown RBP25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 CbsQ91WT9 561 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 Dbndd2Q9CRD4 158 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 Gm45194A0A140LJG2 572 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 A0A286YCQ6 122 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 Gcnt4E9Q649 455 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 SfnO70456 248 aaKnown RBP25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 UgcgO88693 394 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 Emc10Q3TAS6 258 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 NntQ61941 1086 aaKnown RBP25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 Ppp1r13bQ62415 1087 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 Pcdhgc5Q91XW9 944 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 Galnt15Q9D2N8 638 aa25.25■■□□□ 1.63
Cln6-201ENSMUST00000034776 Exoc4O35382 975 aa25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 Tmem232Q5K6N0 675 aa25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 Krt31Q61765 416 aa25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 YwhabQ9CQV8 246 aaKnown RBP25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 Mzb1Q9D8I1 188 aa25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 Rsrc2A2RTL5 376 aaKnown RBP25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 Ap1b1O35643 943 aaKnown RBP25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 Rbm46P86049 533 aa25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 Ccdc42Q5SV66 316 aa25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 Exoc3Q6KAR6 755 aa25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 1700020D05RikQ99PB1 294 aa25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 Rpf2Q9JJ80 306 aaKnown RBP25.24■■□□□ 1.63
Cln6-201ENSMUST00000034776 Tnfrsf11aO35305 625 aa25.23■■□□□ 1.63
Cln6-201ENSMUST00000034776 Adamts10P58459 1104 aa25.23■■□□□ 1.63
Cln6-201ENSMUST00000034776 Cct6aP80317 531 aaKnown RBP25.23■■□□□ 1.63
Cln6-201ENSMUST00000034776 Sox10Q04888 466 aa25.23■■□□□ 1.63
Cln6-201ENSMUST00000034776 Hdac10Q6P3E7 666 aa25.23■■□□□ 1.63
Cln6-201ENSMUST00000034776 Tmco3Q8BH01 678 aa25.23■■□□□ 1.63
Cln6-201ENSMUST00000034776 Dnajc18Q9CZJ9 357 aa25.23■■□□□ 1.63
Cln6-201ENSMUST00000034776 Hebp1Q9R257 190 aa25.23■■□□□ 1.63
Cln6-201ENSMUST00000034776 Psmc5P62196 406 aa25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 Arl14Q3SXC5 192 aa25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 Sec31aQ3UPL0 1230 aaKnown RBP25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 MaeaQ4VC33 396 aa25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 Tgoln2Q62314 363 aa25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 Cep70Q6IQY5 616 aa25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 Asic3Q6X1Y6 530 aa25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 Phc3Q8CHP6 981 aa25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 Rhobtb2Q91V93 728 aa25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 Rrp1bQ91YK2 724 aaKnown RBP25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 Oog1E9Q5G7 496 aa25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 Nfxl1E9Q8I7 918 aaKnown RBP25.22■■□□□ 1.63
Cln6-201ENSMUST00000034776 Per1O35973 1291 aa25.22■■□□□ 1.63
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms