RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Krt5Q922U2 580 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Q9DAQ4 598 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Cpb2Q9JHH6 422 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 NpeppsQ11011 920 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Eaf2Q91ZD6 262 aa10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Zranb2Q9R020 330 aaKnown RBP10.88□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gm1661E9Q963 441 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Q3TQQ9 903 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Rasa3Q60790 834 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Rrp15Q9CYX7 281 aaKnown RBP10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Mroh6V9GX81 722 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Scgb2b18A0A087WPA9 112 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Adgrf5G5E8Q8 1348 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Per2O54943 1257 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Kcna3P16390 528 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Kpnb1P70168 876 aaKnown RBP10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Sult1d1Q3UZZ6 295 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Arhgef1Q61210 920 aaKnown RBP10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Atp4aQ64436 1033 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Psmd5Q8BJY1 504 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Tbc1d23Q8K0F1 684 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pfkfb3A7UAK5 555 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Aoc3O70423 765 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pcif1P59114 706 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Zscan2Q07230 614 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ckap2Q3V1H1 664 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Thumpd2Q9CZB3 528 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Riok3Q9DBU3 519 aaKnown RBP10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Usp54Q8BL06 1588 aaKnown RBP10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Zfp651E9PZ11 729 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ctnnal1O88327 731 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pfdn4Q3UWL8 134 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ubn1Q4G0F8 1135 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 HarsQ61035 509 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Slc9a1Q61165 820 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 CnstQ8CBC4 711 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ccdc130Q9D516 385 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ubxn11Q9D572 484 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Phf2Q9WTU0 1096 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 GakQ99KY4 1305 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ttc17E9PVB5 1198 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Myl1P05977 188 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Mark3Q03141 753 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pfdn6Q03958 127 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Fam53cQ8BXQ8 393 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Satb2Q8VI24 733 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Dgcr8Q9EQM6 773 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 C1qbpO35658 278 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pde9aO70628 534 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Chp1P61022 195 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Tmtc1Q3UV71 942 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pacsin1Q61644 441 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Atl2Q6PA06 583 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ino80bQ99PT3 375 aaKnown RBP10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Capn9Q9D805 690 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 AvenQ9D9K3 342 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 PalmdQ9JHU2 551 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pus3Q9JI38 481 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Trp53inp1Q9QXE4 239 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Eif2ak1Q9Z2R9 619 aa10.87□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Myo3aQ8K3H5 1613 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 1700011I03RikE9PYL8 271 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 C2cd2E9Q3C1 696 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 1700122O11RikJ3QPW6 241 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ugt1a6bK9J7B2 531 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Art2bO35975 289 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Rnpc3Q3UZ01 514 aaKnown RBP10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ugt1a6Q64435 531 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ugt1a7cQ6ZQM8 531 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Olfr119Q7TRJ5 321 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pcdhb12Q91Y07 789 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ddah1Q9CWS0 285 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Itpripl1A2ASA8 547 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Kcnh2O35219 1162 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Krt26Q3TRJ4 462 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Pla2g4cQ64GA5 597 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gramd1bQ80TI0 738 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Trip10Q8CJ53 603 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Psip1Q99JF8 528 aaKnown RBP10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Fthl17aQ9DAX0 182 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Tnni3P48787 211 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Fam178bQ24JP3 464 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ankrd13dQ6PD24 605 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Mtmr6Q8VE11 617 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Abca8bQ8K440 1620 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Mcf2A2AEU1 1111 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Herc3A6H6S0 1050 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 CidebO70303 219 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 RaraP11416 462 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 TxkP42682 527 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Slc1a1P51906 523 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Gpt2Q8BGT5 522 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Uap1Q91YN5 522 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Abcc1O35379 1528 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Casp12O08736 419 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Fdx1P46656 188 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 LmnaP48678 665 aaKnown RBP10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Taf1bP97358 586 aa10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 G3bp2P97379 482 aaKnown RBP10.86□□□□□ -0.67
Ubr1-201ENSMUST00000028728 Ddx3xQ62167 662 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 33.6 ms