RNA–Protein interactions for RNA: YLR308W

CDA2, Transcript of Chitin deacetylase, yeast

Gene CDA2, Length 939 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDA2	YLR308W	VMA2	P16140	517 aa	Known RBP	4.09	□□□□□ -1.75
CDA2	YLR308W	YCL068C	P25593	260 aa		4.09	□□□□□ -1.75
CDA2	YLR308W	ARO2	P28777	376 aa	Known RBP	4.09	□□□□□ -1.75
CDA2	YLR308W	ANP1	P32629	500 aa		4.09	□□□□□ -1.75
CDA2	YLR308W	COX14	P39103	70 aa		4.09	□□□□□ -1.75
CDA2	YLR308W	PHB2	P50085	310 aa		4.09	□□□□□ -1.75
CDA2	YLR308W	MPS2	P53159	387 aa		4.09	□□□□□ -1.75
CDA2	YLR308W	YGR016W	P53209	190 aa		4.09	□□□□□ -1.75
CDA2	YLR308W	WSC2	P53832	503 aa		4.09	□□□□□ -1.75
CDA2	YLR308W	GOR1	P53839	350 aa		4.09	□□□□□ -1.75
CDA2	YLR308W	RAX1	Q08760	435 aa		4.09	□□□□□ -1.75
CDA2	YLR308W	SPT15	P13393	240 aa	Known RBP	4.08	□□□□□ -1.76
CDA2	YLR308W	YBL059W	P34224	193 aa		4.08	□□□□□ -1.76
CDA2	YLR308W	UIP5	P36137	443 aa		4.08	□□□□□ -1.76
CDA2	YLR308W	LAS1	P36146	502 aa	Predicted RBP	4.08	□□□□□ -1.76
CDA2	YLR308W	QDR3	P38227	689 aa		4.08	□□□□□ -1.76
CDA2	YLR308W	SDS24	P38314	527 aa		4.08	□□□□□ -1.76
CDA2	YLR308W	TIF5	P38431	405 aa	Known RBP	4.08	□□□□□ -1.76
CDA2	YLR308W	MNL1	P38888	796 aa		4.08	□□□□□ -1.76
CDA2	YLR308W	TOS3	P43637	560 aa		4.08	□□□□□ -1.76
CDA2	YLR308W	RPA34	P47006	233 aa	Predicted RBP	4.08	□□□□□ -1.76
CDA2	YLR308W	BOR1	P53838	576 aa		4.08	□□□□□ -1.76
CDA2	YLR308W	LOT6	Q07923	191 aa		4.08	□□□□□ -1.76
CDA2	YLR308W	NCA2	Q12374	616 aa		4.08	□□□□□ -1.76
CDA2	YLR308W	YCL021W-A	Q96VH3	125 aa		4.08	□□□□□ -1.76
CDA2	YLR308W	YSC83	P32792	385 aa		4.07	□□□□□ -1.76
CDA2	YLR308W	CHK1	P38147	527 aa		4.07	□□□□□ -1.76
CDA2	YLR308W	GPI16	P38875	610 aa		4.07	□□□□□ -1.76
CDA2	YLR308W	ATM1	P40416	690 aa		4.07	□□□□□ -1.76
CDA2	YLR308W	CHS6	P40955	746 aa		4.07	□□□□□ -1.76
CDA2	YLR308W	NCA3	P46955	337 aa		4.07	□□□□□ -1.76
CDA2	YLR308W	RRP46	P53256	223 aa	Predicted RBP	4.07	□□□□□ -1.76
CDA2	YLR308W	BTN2	P53286	410 aa		4.07	□□□□□ -1.76
CDA2	YLR308W	MEH1	Q02205	184 aa		4.07	□□□□□ -1.76
CDA2	YLR308W	RRB1	Q04225	511 aa	Known RBP	4.07	□□□□□ -1.76
CDA2	YLR308W	PRM6	Q04705	352 aa		4.07	□□□□□ -1.76
CDA2	YLR308W	HTZ1	Q12692	134 aa	Known RBP	4.07	□□□□□ -1.76
CDA2	YLR308W	RPL12A	P0CX53	165 aa	Known RBP	4.06	□□□□□ -1.76
CDA2	YLR308W	RPL12B	P0CX54	165 aa		4.06	□□□□□ -1.76
CDA2	YLR308W	NAT1	P12945	854 aa	Known RBP	4.06	□□□□□ -1.76
CDA2	YLR308W	CBS2	P14905	389 aa		4.06	□□□□□ -1.76
CDA2	YLR308W	CPR4	P25334	318 aa		4.06	□□□□□ -1.76
CDA2	YLR308W	KRR1	P25586	316 aa	Predicted RBP	4.06	□□□□□ -1.76
CDA2	YLR308W	FAA1	P30624	700 aa	Known RBP	4.06	□□□□□ -1.76
CDA2	YLR308W	DEG1	P31115	442 aa	Known RBP	4.06	□□□□□ -1.76
CDA2	YLR308W	YSW1	P38280	609 aa		4.06	□□□□□ -1.76
CDA2	YLR308W	PRM5	P40476	318 aa		4.06	□□□□□ -1.76
CDA2	YLR308W	YGR117C	P53270	476 aa		4.06	□□□□□ -1.76
CDA2	YLR308W	TOF1	P53840	1238 aa		4.06	□□□□□ -1.76
CDA2	YLR308W	CCE1	Q03702	353 aa		4.06	□□□□□ -1.76
CDA2	YLR308W	URC2	Q04411	772 aa		4.06	□□□□□ -1.76
CDA2	YLR308W	PBA1	Q05778	276 aa		4.06	□□□□□ -1.76
CDA2	YLR308W	NFI1	Q12216	726 aa		4.06	□□□□□ -1.76
CDA2	YLR308W	POM152	P39685	1337 aa		4.05	□□□□□ -1.76
CDA2	YLR308W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
CDA2	YLR308W	TPK3	P05986	398 aa		4.05	□□□□□ -1.76
CDA2	YLR308W	MRPL8	P22353	238 aa		4.05	□□□□□ -1.76
CDA2	YLR308W	ITR1	P30605	584 aa		4.05	□□□□□ -1.76
CDA2	YLR308W	YEL043W	P32618	956 aa		4.05	□□□□□ -1.76
CDA2	YLR308W	YEF1	P32622	495 aa		4.05	□□□□□ -1.76
CDA2	YLR308W	YHR131C	P38835	850 aa		4.05	□□□□□ -1.76
CDA2	YLR308W	MAM33	P40513	266 aa		4.05	□□□□□ -1.76
CDA2	YLR308W	YIL029C	P40538	142 aa		4.05	□□□□□ -1.76
CDA2	YLR308W	MTQ1	P53944	314 aa		4.05	□□□□□ -1.76
CDA2	YLR308W	SNT309	Q06091	175 aa	Predicted RBP	4.05	□□□□□ -1.76
CDA2	YLR308W	CUE5	Q08412	411 aa	Known RBP	4.05	□□□□□ -1.76
CDA2	YLR308W	TPM1	P17536	199 aa	Known RBP	4.04	□□□□□ -1.76
CDA2	YLR308W	UBA1	P22515	1024 aa	Known RBP	4.04	□□□□□ -1.76
CDA2	YLR308W	RDS1	P25611	832 aa		4.04	□□□□□ -1.76
CDA2	YLR308W	DPH2	P32461	534 aa		4.04	□□□□□ -1.76
CDA2	YLR308W	SMI1	P32566	505 aa		4.04	□□□□□ -1.76
CDA2	YLR308W	RAD5	P32849	1169 aa	Predicted RBP	4.04	□□□□□ -1.76
CDA2	YLR308W	PTH1	P38876	190 aa	Known RBP	4.04	□□□□□ -1.76
CDA2	YLR308W	JLP2	P40206	208 aa		4.04	□□□□□ -1.76
CDA2	YLR308W	STE24	P47154	453 aa		4.04	□□□□□ -1.76
CDA2	YLR308W	YIP5	P53108	310 aa		4.04	□□□□□ -1.76
CDA2	YLR308W	TRM112	P53738	135 aa	Predicted RBP	4.04	□□□□□ -1.76
CDA2	YLR308W	HXT11	P54862	567 aa		4.04	□□□□□ -1.76
CDA2	YLR308W	SPR6	Q01684	191 aa		4.04	□□□□□ -1.76
CDA2	YLR308W	DBP9	Q06218	594 aa	Known RBP	4.04	□□□□□ -1.76
CDA2	YLR308W	TSR1	Q07381	788 aa	Known RBP	4.04	□□□□□ -1.76
CDA2	YLR308W	RNH203	Q12338	110 aa		4.04	□□□□□ -1.76
CDA2	YLR308W	DAL2	P25335	343 aa		4.03	□□□□□ -1.76
CDA2	YLR308W	EFB1	P32471	206 aa	Known RBP	4.03	□□□□□ -1.76
CDA2	YLR308W	NDT80	P38830	627 aa		4.03	□□□□□ -1.76
CDA2	YLR308W	PRM1	P53835	661 aa		4.03	□□□□□ -1.76
CDA2	YLR308W	CWC25	P53854	179 aa	Known RBP	4.03	□□□□□ -1.76
CDA2	YLR308W	MGR3	Q04472	501 aa		4.03	□□□□□ -1.76
CDA2	YLR308W	MDM36	Q06820	579 aa		4.03	□□□□□ -1.76
CDA2	YLR308W	PGC1	Q08959	321 aa		4.03	□□□□□ -1.76
CDA2	YLR308W	YOP1	Q12402	180 aa		4.03	□□□□□ -1.76
CDA2	YLR308W	PIS1	P06197	220 aa	Known RBP	4.02	□□□□□ -1.77
CDA2	YLR308W	MNS1	P32906	549 aa		4.02	□□□□□ -1.77
CDA2	YLR308W	MCR1	P36060	302 aa	Known RBP	4.02	□□□□□ -1.77
CDA2	YLR308W	YIL089W	P40500	205 aa		4.02	□□□□□ -1.77
CDA2	YLR308W	YIL067C	P40514	678 aa		4.02	□□□□□ -1.77
CDA2	YLR308W	SPG5	P42933	373 aa		4.02	□□□□□ -1.77
CDA2	YLR308W	MDE1	P47095	244 aa		4.02	□□□□□ -1.77
CDA2	YLR308W	YNR068C	P53754	272 aa		4.02	□□□□□ -1.77
CDA2	YLR308W	AQR1	P53943	586 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms