RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	PGA2	P53903	129 aa		4.9	□□□□□ -1.63
SKG1	YKR100C	SMA2	Q04658	369 aa		4.9	□□□□□ -1.63
SKG1	YKR100C	RPL20A	P0CX23	172 aa	Known RBP	4.89	□□□□□ -1.63
SKG1	YKR100C	RPL20B	P0CX24	172 aa	Predicted RBP	4.89	□□□□□ -1.63
SKG1	YKR100C	SCL1	P21243	252 aa	Known RBP	4.89	□□□□□ -1.63
SKG1	YKR100C	RER1	P25560	188 aa		4.89	□□□□□ -1.63
SKG1	YKR100C	YKL023W	P36103	277 aa	Known RBP	4.89	□□□□□ -1.63
SKG1	YKR100C	YHR210C	P38893	341 aa		4.89	□□□□□ -1.63
SKG1	YKR100C	YAL037W	P39728	267 aa		4.89	□□□□□ -1.63
SKG1	YKR100C	RSM25	P40496	264 aa		4.89	□□□□□ -1.63
SKG1	YKR100C	ZIM17	P42844	174 aa		4.89	□□□□□ -1.63
SKG1	YKR100C	ELP2	P42935	788 aa		4.89	□□□□□ -1.63
SKG1	YKR100C	PMT4	P46971	762 aa		4.89	□□□□□ -1.63
SKG1	YKR100C	YJL132W	P47014	750 aa		4.89	□□□□□ -1.63
SKG1	YKR100C	RPC17	P47076	161 aa		4.89	□□□□□ -1.63
SKG1	YKR100C	APT1	P49435	187 aa	Known RBP	4.89	□□□□□ -1.63
SKG1	YKR100C	EMC4	P53073	190 aa		4.89	□□□□□ -1.63
SKG1	YKR100C	SYO1	Q07395	620 aa		4.89	□□□□□ -1.63
SKG1	YKR100C	NCE102	Q12207	173 aa	RIP-Chip data	4.89	□□□□□ -1.63	not detected
SKG1	YKR100C	CAR1	P00812	333 aa	Known RBP	4.88	□□□□□ -1.63
SKG1	YKR100C	MF(ALPHA)1	P01149	165 aa		4.88	□□□□□ -1.63
SKG1	YKR100C	YCR102C	P25608	368 aa		4.88	□□□□□ -1.63
SKG1	YKR100C	YCR022C	P25620	114 aa		4.88	□□□□□ -1.63
SKG1	YKR100C	EPL1	P43572	832 aa		4.88	□□□□□ -1.63
SKG1	YKR100C	CUE3	P53137	624 aa	Known RBP	4.88	□□□□□ -1.63
SKG1	YKR100C	YGR126W	P53274	230 aa		4.88	□□□□□ -1.63
SKG1	YKR100C	LUC7	Q07508	261 aa	Predicted RBP	4.88	□□□□□ -1.63
SKG1	YKR100C	YLR030W	Q07967	263 aa		4.88	□□□□□ -1.63
SKG1	YKR100C	DDC1	Q08949	612 aa		4.88	□□□□□ -1.63
SKG1	YKR100C	KAR3	P17119	729 aa		4.87	□□□□□ -1.63
SKG1	YKR100C	SSE2	P32590	693 aa	Known RBP	4.87	□□□□□ -1.63
SKG1	YKR100C	YBR144C	P34215	104 aa		4.87	□□□□□ -1.63
SKG1	YKR100C	DTR1	P38125	572 aa		4.87	□□□□□ -1.63
SKG1	YKR100C	YPI1	P43587	155 aa		4.87	□□□□□ -1.63
SKG1	YKR100C	DRN1	P53255	507 aa	Known RBP	4.87	□□□□□ -1.63
SKG1	YKR100C	BUD22	Q04347	519 aa	Known RBP	4.87	□□□□□ -1.63
SKG1	YKR100C	YDL009C	Q12210	107 aa		4.87	□□□□□ -1.63
SKG1	YKR100C	SPE4	Q12455	300 aa		4.87	□□□□□ -1.63
SKG1	YKR100C	INH1	P01097	85 aa		4.86	□□□□□ -1.63
SKG1	YKR100C	RPL19A	P0CX82	189 aa	Known RBP	4.86	□□□□□ -1.63
SKG1	YKR100C	RPL19B	P0CX83	189 aa	Predicted RBP	4.86	□□□□□ -1.63
SKG1	YKR100C	ARA1	P38115	344 aa		4.86	□□□□□ -1.63
SKG1	YKR100C	PRM1	P53835	661 aa		4.86	□□□□□ -1.63
SKG1	YKR100C	YLH47	Q06493	454 aa		4.86	□□□□□ -1.63
SKG1	YKR100C	YKR104W	P0CE69	306 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	CLC1	P17891	233 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	DAL81	P21657	970 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	POL4	P25615	582 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	YIH1	P25637	258 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	PMU1	P36069	295 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	MAL32	P38158	584 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	IDP2	P41939	412 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	YJR079W	P47126	109 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	YJR154W	P47181	346 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	PRP24	P49960	444 aa	Known RBP	4.85	□□□□□ -1.63
SKG1	YKR100C	LCL3	P53153	274 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	YOR365C	Q08844	703 aa		4.85	□□□□□ -1.63
SKG1	YKR100C	UBR1	P19812	1950 aa		4.84	□□□□□ -1.63
SKG1	YKR100C	FRS2	P15625	503 aa	Known RBP	4.84	□□□□□ -1.63
SKG1	YKR100C	YCK1	P23291	538 aa		4.84	□□□□□ -1.63
SKG1	YKR100C	SAC6	P32599	642 aa	Known RBP	4.84	□□□□□ -1.63
SKG1	YKR100C	YSC83	P32792	385 aa		4.84	□□□□□ -1.63
SKG1	YKR100C	YBP1	P38315	674 aa		4.84	□□□□□ -1.63
SKG1	YKR100C	CIN4	P39110	191 aa		4.84	□□□□□ -1.63
SKG1	YKR100C	DSE1	P40077	573 aa		4.84	□□□□□ -1.63
SKG1	YKR100C	YLR046C	Q12253	270 aa		4.84	□□□□□ -1.63
SKG1	YKR100C	BPH1	P25356	2167 aa		4.83	□□□□□ -1.64
SKG1	YKR100C	GEX1	P25596	615 aa		4.83	□□□□□ -1.64
SKG1	YKR100C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
SKG1	YKR100C	CDC13	P32797	924 aa	Known RBP	4.83	□□□□□ -1.64
SKG1	YKR100C	TUL1	P36096	758 aa		4.83	□□□□□ -1.64
SKG1	YKR100C	SHO1	P40073	367 aa		4.83	□□□□□ -1.64
SKG1	YKR100C	RET3	P53600	189 aa		4.83	□□□□□ -1.64
SKG1	YKR100C	TRM112	P53738	135 aa	Predicted RBP	4.83	□□□□□ -1.64
SKG1	YKR100C	FUS2	Q05670	677 aa		4.83	□□□□□ -1.64
SKG1	YKR100C	MRPL51	Q06090	140 aa	Predicted RBP	4.83	□□□□□ -1.64
SKG1	YKR100C	FAS1	P07149	2051 aa	Known RBP	4.82	□□□□□ -1.64
SKG1	YKR100C	RAD52	P06778	471 aa	Known RBP	4.82	□□□□□ -1.64
SKG1	YKR100C	ATR1	P13090	542 aa		4.82	□□□□□ -1.64
SKG1	YKR100C	SUI2	P20459	304 aa	Known RBP	4.82	□□□□□ -1.64
SKG1	YKR100C	TRX2	P22803	104 aa	Known RBP	4.82	□□□□□ -1.64
SKG1	YKR100C	SPR1	P32603	445 aa		4.82	□□□□□ -1.64
SKG1	YKR100C	YJR054W	P47114	497 aa		4.82	□□□□□ -1.64
SKG1	YKR100C	MEP3	P53390	489 aa		4.82	□□□□□ -1.64
SKG1	YKR100C	WSC2	P53832	503 aa		4.82	□□□□□ -1.64
SKG1	YKR100C	PIR1	Q03178	341 aa		4.82	□□□□□ -1.64
SKG1	YKR100C	RCN2	Q12044	265 aa		4.82	□□□□□ -1.64
SKG1	YKR100C	YCL021W-A	Q96VH3	125 aa		4.82	□□□□□ -1.64
SKG1	YKR100C	PEP4	P07267	405 aa	Known RBP	4.81	□□□□□ -1.64
SKG1	YKR100C	HOM3	P10869	527 aa		4.81	□□□□□ -1.64
SKG1	YKR100C	MRP13	P12686	339 aa		4.81	□□□□□ -1.64
SKG1	YKR100C	UBC6	P33296	250 aa	Predicted RBP	4.81	□□□□□ -1.64
SKG1	YKR100C	TIF3	P34167	436 aa	Known RBP	4.81	□□□□□ -1.64
SKG1	YKR100C	YBL029W	P38201	376 aa		4.81	□□□□□ -1.64
SKG1	YKR100C	TRM9	P49957	279 aa		4.81	□□□□□ -1.64
SKG1	YKR100C	YGL138C	P53122	345 aa		4.81	□□□□□ -1.64
SKG1	YKR100C	MAL12	P53341	584 aa		4.81	□□□□□ -1.64
SKG1	YKR100C	YKU80	Q04437	629 aa		4.81	□□□□□ -1.64
SKG1	YKR100C	IVY1	Q04934	453 aa		4.81	□□□□□ -1.64
SKG1	YKR100C	FMP40	Q08968	688 aa	Predicted RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 82.7 ms