RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C RPS12P48589 143 aaKnown RBP9.48□□□□□ -0.89
SHB17YKR043C BCP1Q06338 283 aa9.48□□□□□ -0.89
SHB17YKR043C MFG1Q07684 458 aa9.48□□□□□ -0.89
SHB17YKR043C MMP1Q12372 583 aa9.48□□□□□ -0.89
SHB17YKR043C HTA1P04911 132 aaKnown RBP9.47□□□□□ -0.89
SHB17YKR043C RPL20AP0CX23 172 aaKnown RBP9.47□□□□□ -0.89
SHB17YKR043C RPL20BP0CX24 172 aaPredicted RBP9.47□□□□□ -0.89
SHB17YKR043C UGA1P17649 471 aa9.47□□□□□ -0.89
SHB17YKR043C YAP1P19880 650 aaKnown RBP9.47□□□□□ -0.89
SHB17YKR043C YGR079WP53249 370 aa9.47□□□□□ -0.89
SHB17YKR043C YNL033WP53964 284 aa9.47□□□□□ -0.89
SHB17YKR043C YNL019CP53975 284 aa9.47□□□□□ -0.89
SHB17YKR043C YOR376WQ08900 122 aa9.47□□□□□ -0.89
SHB17YKR043C PAR32Q12515 295 aaKnown RBP9.47□□□□□ -0.89
SHB17YKR043C HAA1Q12753 694 aaKnown RBP9.47□□□□□ -0.89
SHB17YKR043C PUT2P07275 575 aa9.46□□□□□ -0.9
SHB17YKR043C RPP1BP10622 106 aaKnown RBP9.46□□□□□ -0.9
SHB17YKR043C ZWF1P11412 505 aaKnown RBP9.46□□□□□ -0.9
SHB17YKR043C MER1P16523 270 aa9.46□□□□□ -0.9
SHB17YKR043C YCR102CP25608 368 aa9.46□□□□□ -0.9
SHB17YKR043C SEA4P38164 1038 aa9.46□□□□□ -0.9
SHB17YKR043C ALG3P38179 458 aa9.46□□□□□ -0.9
SHB17YKR043C FZO1P38297 855 aa9.46□□□□□ -0.9
SHB17YKR043C MAM33P40513 266 aa9.46□□□□□ -0.9
SHB17YKR043C MDV1P47025 714 aa9.46□□□□□ -0.9
SHB17YKR043C APS3P47064 194 aa9.46□□□□□ -0.9
SHB17YKR043C YGL260WP53056 76 aa9.46□□□□□ -0.9
SHB17YKR043C ARI1P53111 347 aaKnown RBP9.46□□□□□ -0.9
SHB17YKR043C RNH70P53331 553 aa9.46□□□□□ -0.9
SHB17YKR043C ATG26Q06321 1198 aa9.46□□□□□ -0.9
SHB17YKR043C YPS7Q06325 596 aa9.46□□□□□ -0.9
SHB17YKR043C ARR1Q06596 294 aa9.46□□□□□ -0.9
SHB17YKR043C YPL225WQ08971 146 aaKnown RBP9.46□□□□□ -0.9
SHB17YKR043C TMS1Q12116 473 aa9.46□□□□□ -0.9
SHB17YKR043C PMR1P13586 950 aa9.45□□□□□ -0.9
SHB17YKR043C CLB3P24870 427 aa9.45□□□□□ -0.9
SHB17YKR043C PDB1P32473 366 aaKnown RBP9.45□□□□□ -0.9
SHB17YKR043C LHP1P33399 275 aaKnown RBP9.45□□□□□ -0.9
SHB17YKR043C MRP8P35719 219 aa9.45□□□□□ -0.9
SHB17YKR043C TUL1P36096 758 aa9.45□□□□□ -0.9
SHB17YKR043C FAA2P39518 744 aa9.45□□□□□ -0.9
SHB17YKR043C TPA1P40032 644 aaKnown RBP9.45□□□□□ -0.9
SHB17YKR043C ASA1Q06822 443 aa9.45□□□□□ -0.9
SHB17YKR043C PRP46Q12417 451 aaPredicted RBP9.45□□□□□ -0.9
SHB17YKR043C NGG1P32494 702 aa9.44□□□□□ -0.9
SHB17YKR043C KAE1P36132 386 aa9.44□□□□□ -0.9
SHB17YKR043C ZTA1P38230 334 aaKnown RBP9.44□□□□□ -0.9
SHB17YKR043C TDP1P38319 544 aa9.44□□□□□ -0.9
SHB17YKR043C YHR218WP38899 603 aa9.44□□□□□ -0.9
SHB17YKR043C DSS1P39112 969 aa9.44□□□□□ -0.9
SHB17YKR043C ARF3P40994 183 aaRIP-Chip data9.44□□□□□ -0.9not detected
SHB17YKR043C AAD10P47182 288 aa9.44□□□□□ -0.9
SHB17YKR043C VPS73P53142 486 aaKnown RBP9.44□□□□□ -0.9
SHB17YKR043C IGO1P53897 168 aa9.44□□□□□ -0.9
SHB17YKR043C SVL3Q03088 825 aaKnown RBP9.44□□□□□ -0.9
SHB17YKR043C ACL4Q03771 387 aa9.44□□□□□ -0.9
SHB17YKR043C RAD30Q04049 632 aa9.44□□□□□ -0.9
SHB17YKR043C ATG38Q05789 226 aaKnown RBP9.44□□□□□ -0.9
SHB17YKR043C RPP2BP02400 110 aaKnown RBP9.43□□□□□ -0.9
SHB17YKR043C MSS18P08593 268 aa9.43□□□□□ -0.9
SHB17YKR043C GAL3P13045 520 aa9.43□□□□□ -0.9
SHB17YKR043C RPS1BP23248 255 aaKnown RBP9.43□□□□□ -0.9
SHB17YKR043C PEX6P33760 1030 aa9.43□□□□□ -0.9
SHB17YKR043C YEL020CP39994 560 aa9.43□□□□□ -0.9
SHB17YKR043C ALG5P40350 334 aa9.43□□□□□ -0.9
SHB17YKR043C SEC24P40482 926 aaKnown RBP9.43□□□□□ -0.9
SHB17YKR043C GET1P53192 235 aa9.43□□□□□ -0.9
SHB17YKR043C MPA43P53583 542 aaPredicted RBP9.43□□□□□ -0.9
SHB17YKR043C PSF1Q12488 208 aa9.43□□□□□ -0.9
SHB17YKR043C IPP1P00817 287 aaKnown RBP9.42□□□□□ -0.9
SHB17YKR043C AI1P03875 834 aa9.42□□□□□ -0.9
SHB17YKR043C CDC9P04819 755 aa9.42□□□□□ -0.9
SHB17YKR043C SAC7P17121 654 aa9.42□□□□□ -0.9
SHB17YKR043C ADH7P25377 361 aa9.42□□□□□ -0.9
SHB17YKR043C YIM1P28625 365 aa9.42□□□□□ -0.9
SHB17YKR043C EMP70P32802 667 aa9.42□□□□□ -0.9
SHB17YKR043C YOR062CP36025 268 aa9.42□□□□□ -0.9
SHB17YKR043C OM14P38325 134 aa9.42□□□□□ -0.9
SHB17YKR043C TSL1P38427 1098 aaKnown RBP9.42□□□□□ -0.9
SHB17YKR043C GID8P40208 455 aa9.42□□□□□ -0.9
SHB17YKR043C JEM1P40358 645 aa9.42□□□□□ -0.9
SHB17YKR043C GPI1P53306 609 aa9.42□□□□□ -0.9
SHB17YKR043C YLR460CP54007 376 aa9.42□□□□□ -0.9
SHB17YKR043C ATG21Q02887 496 aa9.42□□□□□ -0.9
SHB17YKR043C YDR209CQ03480 137 aa9.42□□□□□ -0.9
SHB17YKR043C NAT4Q04751 285 aa9.42□□□□□ -0.9
SHB17YKR043C CYK3Q07533 885 aa9.42□□□□□ -0.9
SHB17YKR043C DCI1Q08558 271 aa9.42□□□□□ -0.9
SHB17YKR043C GCN1P33892 2672 aaKnown RBP9.42□□□□□ -0.9
SHB17YKR043C RPL7AP05737 244 aaKnown RBP9.41□□□□□ -0.9
SHB17YKR043C BAR1P12630 587 aa9.41□□□□□ -0.9
SHB17YKR043C CBS1P14066 229 aa9.41□□□□□ -0.9
SHB17YKR043C THR1P17423 357 aaKnown RBP9.41□□□□□ -0.9
SHB17YKR043C CTR86P25355 563 aa9.41□□□□□ -0.9
SHB17YKR043C ANS1P38832 159 aa9.41□□□□□ -0.9
SHB17YKR043C RSP5P39940 809 aaKnown RBP9.41□□□□□ -0.9
SHB17YKR043C PAC1P39946 494 aaKnown RBP9.41□□□□□ -0.9
SHB17YKR043C YIL067CP40514 678 aa9.41□□□□□ -0.9
SHB17YKR043C PHB1P40961 287 aa9.41□□□□□ -0.9
SHB17YKR043C CIN1P40987 1014 aa9.41□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms